Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 TTTY23B-201ENST00000442790 549 ntBASIC12.06□□□□□ -0.48
NICN1Q9BSH3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 AC009955.4-201ENST00000597192 544 ntBASIC12.06□□□□□ -0.48
NICN1Q9BSH3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 AC073862.5-201ENST00000624129 2027 ntBASIC12.06□□□□□ -0.48
NICN1Q9BSH3 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NICN1Q9BSH3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 AC020917.4-201ENST00000623994 1999 ntBASIC12.05□□□□□ -0.48
NICN1Q9BSH3 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 AC010970.1-201ENST00000445125 1848 ntBASIC12.05□□□□□ -0.48
NICN1Q9BSH3 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 AC098614.1-201ENST00000368528 745 ntBASIC12.05□□□□□ -0.48
NICN1Q9BSH3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms