Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 AC015909.5-201ENST00000624336 2266 ntBASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 AC093462.1-201ENST00000621167 1683 ntBASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0A1Q93050 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 AC108734.2-201ENST00000420887 1069 ntBASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 PRSS3P1-201ENST00000503996 742 ntBASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 AL049840.2-201ENST00000602722 535 ntBASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 AC011247.3-201ENST00000603297 438 ntBASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 NAMA-206ENST00000605377 509 ntTSL 5 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0A1Q93050 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATP6V0A1Q93050 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATP6V0A1Q93050 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
ATP6V0A1Q93050 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
ATP6V0A1Q93050 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATP6V0A1Q93050 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.58■□□□□ 0.09
ATP6V0A1Q93050 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATP6V0A1Q93050 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 ST20-AS1-201ENST00000560255 4223 ntBASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 MIR1307-201ENST00000408840 149 ntBASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 PGAM1P12-201ENST00000505622 748 ntBASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 AC093826.1-201ENST00000508655 993 ntBASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 RN7SKP155-201ENST00000516031 288 ntBASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 AC012073.1-201ENST00000606114 1108 ntBASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 AC010976.2-201ENST00000609697 852 ntBASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 AC002472.4-201ENST00000641915 272 ntBASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0A1Q93050 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms