Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ABCD1P3-201ENST00000562927 605 ntBASIC16.55■□□□□ 0.24
SNED1Q8TER0 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 MIR6893-201ENST00000613458 69 ntBASIC16.55■□□□□ 0.24
SNED1Q8TER0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 AC015813.5-201ENST00000624641 1514 ntBASIC16.55■□□□□ 0.24
SNED1Q8TER0 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 AL031587.5-201ENST00000624344 1849 ntBASIC16.55■□□□□ 0.24
SNED1Q8TER0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 RPL18AP15-201ENST00000430258 517 ntBASIC16.54■□□□□ 0.24
SNED1Q8TER0 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 KRT18P42-201ENST00000505048 1255 ntBASIC16.54■□□□□ 0.24
SNED1Q8TER0 PIGCP1-201ENST00000527583 895 ntBASIC16.54■□□□□ 0.24
SNED1Q8TER0 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 AP000553.2-201ENST00000609038 441 ntBASIC16.54■□□□□ 0.24
SNED1Q8TER0 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 SFPQP1-201ENST00000446621 1786 ntBASIC16.54■□□□□ 0.24
SNED1Q8TER0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SNED1Q8TER0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNED1Q8TER0 MKRN7P-201ENST00000433469 1371 ntBASIC16.54■□□□□ 0.24
SNED1Q8TER0 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 POP5-201ENST00000341039 913 ntTSL 2 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 TUBB2BP1-201ENST00000404155 871 ntBASIC16.53■□□□□ 0.24
SNED1Q8TER0 SNORA50D-201ENST00000408059 134 ntBASIC16.53■□□□□ 0.24
SNED1Q8TER0 SNORD23-201ENST00000408876 110 ntBASIC16.53■□□□□ 0.24
SNED1Q8TER0 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 DUX4L31-201ENST00000446466 1136 ntBASIC16.53■□□□□ 0.24
SNED1Q8TER0 AC113398.1-201ENST00000464124 406 ntBASIC16.53■□□□□ 0.24
SNED1Q8TER0 FAM86JP-202ENST00000484500 988 ntBASIC16.53■□□□□ 0.24
SNED1Q8TER0 AF186996.6-201ENST00000485294 149 ntBASIC16.53■□□□□ 0.24
SNED1Q8TER0 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC16.53■□□□□ 0.24
SNED1Q8TER0 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 AL031590.1-202ENST00000641466 1737 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms