Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 TUBB2BP1-201ENST00000404155 871 ntBASIC21.35■■□□□ 1.01
VPS8Q8N3P4 REEP5-205ENST00000504247 480 ntTSL 5 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 HNRNPA1P5-201ENST00000558213 966 ntBASIC21.35■■□□□ 1.01
VPS8Q8N3P4 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 AP000769.1-203ENST00000637245 208 ntBASIC21.35■■□□□ 1.01
VPS8Q8N3P4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS8Q8N3P4 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 AC105206.1-202ENST00000314927 2368 ntBASIC21.34■■□□□ 1.01
VPS8Q8N3P4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC21.34■■□□□ 1.01
VPS8Q8N3P4 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 AC024293.1-201ENST00000467930 498 ntBASIC21.34■■□□□ 1.01
VPS8Q8N3P4 AC104212.2-201ENST00000478813 628 ntBASIC21.34■■□□□ 1.01
VPS8Q8N3P4 AK2-208ENST00000487289 920 ntTSL 2 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 GOLGA2P7-209ENST00000560408 745 ntBASIC21.34■■□□□ 1.01
VPS8Q8N3P4 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 AC141586.1-203ENST00000567242 366 ntBASIC21.34■■□□□ 1.01
VPS8Q8N3P4 THY1-209ENST00000580275 578 ntTSL 3 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 AC064850.1-201ENST00000413279 1398 ntBASIC21.34■■□□□ 1.01
VPS8Q8N3P4 AC034205.3-201ENST00000603595 1376 ntBASIC21.34■■□□□ 1.01
VPS8Q8N3P4 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
VPS8Q8N3P4 AC091807.1-201ENST00000418838 1544 ntBASIC21.33■■□□□ 1.01
VPS8Q8N3P4 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 TBC1D3P1-201ENST00000590047 1693 ntBASIC21.33■■□□□ 1.01
VPS8Q8N3P4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 OR10N1P-201ENST00000392758 869 ntBASIC21.33■■□□□ 1.01
VPS8Q8N3P4 MPV17-209ENST00000405983 859 ntTSL 5 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms