Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 MYL6-210ENST00000548400 573 ntTSL 3 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 AC134878.2-201ENST00000620700 1265 ntBASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 AC012531.1-201ENST00000562848 2680 ntBASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 AL358781.1-202ENST00000321081 1360 ntBASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 AL353622.2-201ENST00000605846 425 ntBASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 AL512324.3-201ENST00000619383 882 ntBASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 AL359845.1-201ENST00000458202 1648 ntBASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC42BPAQ5VT25 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 AC008267.3-201ENST00000448776 712 ntBASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 AC008021.1-201ENST00000474180 414 ntBASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 MIR4526-201ENST00000583168 87 ntBASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 AC015818.3-201ENST00000583797 589 ntBASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 HMGA1P2-201ENST00000430198 324 ntBASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 MIR6125-201ENST00000618986 96 ntBASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC20.24■□□□□ 0.83
CDC42BPAQ5VT25 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 Z98259.1-201ENST00000564261 1697 ntBASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms