Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 OR2I1P-209ENST00000641730 5365 ntBASIC15.06■□□□□ 0
TRIM71Q2Q1W2 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 CICP4-201ENST00000447359 2812 ntBASIC15.05■□□□□ 0
TRIM71Q2Q1W2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM71Q2Q1W2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 GH1-203ENST00000351388 685 ntTSL 2 BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 MPV17-209ENST00000405983 859 ntTSL 5 BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 AC112250.1-201ENST00000504640 745 ntBASIC15.05■□□□□ -0
TRIM71Q2Q1W2 AC113347.2-201ENST00000512350 279 ntBASIC15.05■□□□□ -0
TRIM71Q2Q1W2 SRPK2P-201ENST00000523408 1100 ntBASIC15.05■□□□□ -0
TRIM71Q2Q1W2 AC091304.3-201ENST00000566500 716 ntBASIC15.05■□□□□ -0
TRIM71Q2Q1W2 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 AC040160.2-201ENST00000623816 1675 ntBASIC15.05■□□□□ -0
TRIM71Q2Q1W2 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 GUCY2EP-203ENST00000531117 1918 ntBASIC15.05■□□□□ -0
TRIM71Q2Q1W2 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM71Q2Q1W2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 LINC02486-201ENST00000604157 3000 ntBASIC15.04■□□□□ -0
TRIM71Q2Q1W2 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 KRT8P42-201ENST00000405771 1399 ntBASIC15.04■□□□□ -0
TRIM71Q2Q1W2 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.04■□□□□ -0
TRIM71Q2Q1W2 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 AC010086.2-201ENST00000428616 226 ntBASIC15.04■□□□□ -0
TRIM71Q2Q1W2 AC005077.3-201ENST00000449614 213 ntBASIC15.04■□□□□ -0
TRIM71Q2Q1W2 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 AC004801.1-201ENST00000549557 360 ntBASIC15.04■□□□□ -0
TRIM71Q2Q1W2 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 FBXO36P1-201ENST00000579006 471 ntBASIC15.04■□□□□ -0
TRIM71Q2Q1W2 AC132812.1-201ENST00000583145 892 ntBASIC15.04■□□□□ -0
TRIM71Q2Q1W2 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 AC048382.6-201ENST00000621980 1223 ntBASIC15.04■□□□□ -0
TRIM71Q2Q1W2 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRIM71Q2Q1W2 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms