Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SSBP1Q04837 AC138028.6-201ENST00000616106 1482 ntBASIC11.84□□□□□ -0.51
SSBP1Q04837 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.84□□□□□ -0.51
SSBP1Q04837 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
SSBP1Q04837 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SSBP1Q04837 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
SSBP1Q04837 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SSBP1Q04837 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC11.84□□□□□ -0.51
SSBP1Q04837 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.84□□□□□ -0.51
SSBP1Q04837 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC11.84□□□□□ -0.51
SSBP1Q04837 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.84□□□□□ -0.51
SSBP1Q04837 AL512638.1-201ENST00000457493 794 ntBASIC11.84□□□□□ -0.51
SSBP1Q04837 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.84□□□□□ -0.51
SSBP1Q04837 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.84□□□□□ -0.51
SSBP1Q04837 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 RN7SL713P-201ENST00000582127 302 ntBASIC11.84□□□□□ -0.51
SSBP1Q04837 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC11.84□□□□□ -0.51
SSBP1Q04837 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC11.84□□□□□ -0.51
SSBP1Q04837 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.84□□□□□ -0.51
SSBP1Q04837 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.84□□□□□ -0.51
SSBP1Q04837 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 GDA-203ENST00000376986 1771 ntTSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SSBP1Q04837 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SSBP1Q04837 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SSBP1Q04837 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC11.84□□□□□ -0.51
SSBP1Q04837 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SSBP1Q04837 LINC00115-201ENST00000473798 1317 ntBASIC11.84□□□□□ -0.51
SSBP1Q04837 AC134312.5-201ENST00000568031 1313 ntBASIC11.84□□□□□ -0.51
SSBP1Q04837 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SSBP1Q04837 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SSBP1Q04837 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
SSBP1Q04837 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
SSBP1Q04837 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.83□□□□□ -0.52
SSBP1Q04837 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SSBP1Q04837 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC11.83□□□□□ -0.52
SSBP1Q04837 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SSBP1Q04837 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC11.83□□□□□ -0.52
SSBP1Q04837 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
SSBP1Q04837 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SSBP1Q04837 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
SSBP1Q04837 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SSBP1Q04837 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SSBP1Q04837 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SSBP1Q04837 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SSBP1Q04837 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC11.83□□□□□ -0.52
SSBP1Q04837 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC11.83□□□□□ -0.52
SSBP1Q04837 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SSBP1Q04837 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SSBP1Q04837 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SSBP1Q04837 MIR326-201ENST00000362220 95 ntBASIC11.83□□□□□ -0.52
SSBP1Q04837 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SSBP1Q04837 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SSBP1Q04837 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SSBP1Q04837 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.83□□□□□ -0.52
SSBP1Q04837 AC087499.6-201ENST00000411576 835 ntBASIC11.83□□□□□ -0.52
SSBP1Q04837 AC098850.1-201ENST00000419919 790 ntBASIC11.83□□□□□ -0.52
SSBP1Q04837 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.83□□□□□ -0.52
SSBP1Q04837 AC055876.3-201ENST00000431496 288 ntBASIC11.83□□□□□ -0.52
SSBP1Q04837 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.83□□□□□ -0.52
SSBP1Q04837 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.83□□□□□ -0.52
SSBP1Q04837 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.83□□□□□ -0.52
SSBP1Q04837 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC11.83□□□□□ -0.52
SSBP1Q04837 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
SSBP1Q04837 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.83□□□□□ -0.52
SSBP1Q04837 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.83□□□□□ -0.52
SSBP1Q04837 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.83□□□□□ -0.52
SSBP1Q04837 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SSBP1Q04837 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC11.83□□□□□ -0.52
SSBP1Q04837 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.83□□□□□ -0.52
SSBP1Q04837 AC138649.4-201ENST00000612222 287 ntBASIC11.83□□□□□ -0.52
SSBP1Q04837 AC010503.4-201ENST00000615487 688 ntBASIC11.83□□□□□ -0.52
SSBP1Q04837 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
SSBP1Q04837 AC134684.3-201ENST00000641758 218 ntBASIC11.83□□□□□ -0.52
SSBP1Q04837 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms