Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.75□□□□□ -0.37
CACNA1BQ00975 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.75□□□□□ -0.37
CACNA1BQ00975 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CACNA1BQ00975 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 ARL4A-202ENST00000396662 1296 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 MED20-204ENST00000409312 932 ntTSL 2 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 AC096677.3-201ENST00000413162 387 ntBASIC12.74□□□□□ -0.37
CACNA1BQ00975 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 GULOP-201ENST00000454030 748 ntBASIC12.74□□□□□ -0.37
CACNA1BQ00975 RN7SL111P-201ENST00000468841 285 ntBASIC12.74□□□□□ -0.37
CACNA1BQ00975 SRPK2P-201ENST00000523408 1100 ntBASIC12.74□□□□□ -0.37
CACNA1BQ00975 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 ALOX12-AS1-209ENST00000575889 439 ntTSL 3 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 RN7SL455P-201ENST00000580629 282 ntBASIC12.74□□□□□ -0.37
CACNA1BQ00975 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 CASC15-202ENST00000561912 1449 ntTSL 5 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 TBC1D27-202ENST00000424239 1573 ntBASIC12.74□□□□□ -0.37
CACNA1BQ00975 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 RPL3P2-204ENST00000413027 1203 ntBASIC12.74□□□□□ -0.37
CACNA1BQ00975 PFN1P10-201ENST00000455962 327 ntBASIC12.74□□□□□ -0.37
CACNA1BQ00975 RN7SL646P-201ENST00000492969 297 ntBASIC12.74□□□□□ -0.37
CACNA1BQ00975 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 MIR3194-201ENST00000582236 73 ntBASIC12.74□□□□□ -0.37
CACNA1BQ00975 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 AC131212.3-201ENST00000624087 4219 ntBASIC12.74□□□□□ -0.37
CACNA1BQ00975 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CACNA1BQ00975 MTHFR-217ENST00000641820 1569 ntBASIC12.74□□□□□ -0.37
CACNA1BQ00975 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CACNA1BQ00975 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 CICP6-201ENST00000457191 2729 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 HNRNPA1P34-201ENST00000391992 950 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 TSEN15P3-201ENST00000422363 367 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 HNRNPA1P30-202ENST00000440699 997 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 AL391822.1-201ENST00000452580 562 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 AP000926.2-201ENST00000469983 358 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 AC104212.2-201ENST00000478813 628 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 IGKV1-8-201ENST00000495489 398 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 ALG1L14P-201ENST00000514230 434 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 HAX1-211ENST00000532105 771 ntTSL 3 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 AC090825.2-201ENST00000557959 739 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 AC018362.2-202ENST00000567089 562 ntTSL 3 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 AC132825.4-202ENST00000578792 434 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 AL512631.1-201ENST00000604086 840 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 Metazoa_SRP.82-201ENST00000611637 265 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.73□□□□□ -0.37
CACNA1BQ00975 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC12.73□□□□□ -0.37
CACNA1BQ00975 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CACNA1BQ00975 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 239.3 ms