Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.21□□□□□ -0.45
UBA52P62987 COX5BP1-201ENST00000507622 393 ntBASIC12.21□□□□□ -0.45
UBA52P62987 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
UBA52P62987 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.21□□□□□ -0.45
UBA52P62987 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
UBA52P62987 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.21□□□□□ -0.45
UBA52P62987 AC138649.2-201ENST00000615886 705 ntBASIC12.21□□□□□ -0.45
UBA52P62987 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.21□□□□□ -0.45
UBA52P62987 PRSS30P-206ENST00000641773 873 ntBASIC12.21□□□□□ -0.45
UBA52P62987 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.21□□□□□ -0.45
UBA52P62987 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.21□□□□□ -0.45
UBA52P62987 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.21□□□□□ -0.45
UBA52P62987 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBA52P62987 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
UBA52P62987 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBA52P62987 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.21□□□□□ -0.46
UBA52P62987 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.21□□□□□ -0.46
UBA52P62987 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBA52P62987 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UBA52P62987 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBA52P62987 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.21□□□□□ -0.46
UBA52P62987 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.21□□□□□ -0.46
UBA52P62987 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UBA52P62987 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.2□□□□□ -0.46
UBA52P62987 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
UBA52P62987 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
UBA52P62987 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
UBA52P62987 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.2□□□□□ -0.46
UBA52P62987 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.2□□□□□ -0.46
UBA52P62987 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.2□□□□□ -0.46
UBA52P62987 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.2□□□□□ -0.46
UBA52P62987 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.2□□□□□ -0.46
UBA52P62987 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
UBA52P62987 MIR769-201ENST00000390225 118 ntBASIC12.2□□□□□ -0.46
UBA52P62987 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 AL391647.1-201ENST00000395664 511 ntBASIC12.2□□□□□ -0.46
UBA52P62987 AL139094.1-201ENST00000405549 1188 ntBASIC12.2□□□□□ -0.46
UBA52P62987 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.2□□□□□ -0.46
UBA52P62987 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.2□□□□□ -0.46
UBA52P62987 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 AC004066.1-201ENST00000502488 802 ntBASIC12.2□□□□□ -0.46
UBA52P62987 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.2□□□□□ -0.46
UBA52P62987 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.2□□□□□ -0.46
UBA52P62987 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.2□□□□□ -0.46
UBA52P62987 MIR3619-201ENST00000579667 83 ntBASIC12.2□□□□□ -0.46
UBA52P62987 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.2□□□□□ -0.46
UBA52P62987 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.2□□□□□ -0.46
UBA52P62987 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.2□□□□□ -0.46
UBA52P62987 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.2□□□□□ -0.46
UBA52P62987 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.2□□□□□ -0.46
UBA52P62987 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UBA52P62987 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.19□□□□□ -0.46
UBA52P62987 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
UBA52P62987 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.19□□□□□ -0.46
UBA52P62987 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.19□□□□□ -0.46
UBA52P62987 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.19□□□□□ -0.46
UBA52P62987 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 AC009474.1-201ENST00000455096 1565 ntBASIC12.19□□□□□ -0.46
UBA52P62987 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.19□□□□□ -0.46
UBA52P62987 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 AC215219.1-201ENST00000400706 1817 ntBASIC12.19□□□□□ -0.46
UBA52P62987 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
UBA52P62987 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBA52P62987 AL645937.2-201ENST00000396808 931 ntBASIC12.19□□□□□ -0.46
UBA52P62987 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.19□□□□□ -0.46
UBA52P62987 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.19□□□□□ -0.46
UBA52P62987 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.19□□□□□ -0.46
UBA52P62987 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.19□□□□□ -0.46
UBA52P62987 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms