Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.04□□□□□ -0.48
AP3S2P59780 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.04□□□□□ -0.48
AP3S2P59780 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.04□□□□□ -0.48
AP3S2P59780 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.04□□□□□ -0.48
AP3S2P59780 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.04□□□□□ -0.48
AP3S2P59780 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.04□□□□□ -0.48
AP3S2P59780 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.04□□□□□ -0.48
AP3S2P59780 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.04□□□□□ -0.48
AP3S2P59780 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.04□□□□□ -0.48
AP3S2P59780 RRP7BP-205ENST00000566851 833 ntBASIC12.04□□□□□ -0.48
AP3S2P59780 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.04□□□□□ -0.48
AP3S2P59780 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.04□□□□□ -0.48
AP3S2P59780 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC12.04□□□□□ -0.48
AP3S2P59780 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
AP3S2P59780 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.04□□□□□ -0.48
AP3S2P59780 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
AP3S2P59780 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
AP3S2P59780 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S2P59780 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
AP3S2P59780 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.03□□□□□ -0.48
AP3S2P59780 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
AP3S2P59780 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
AP3S2P59780 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
AP3S2P59780 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.03□□□□□ -0.48
AP3S2P59780 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC12.03□□□□□ -0.48
AP3S2P59780 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
AP3S2P59780 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.03□□□□□ -0.48
AP3S2P59780 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
AP3S2P59780 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 RN7SKP175-201ENST00000408472 289 ntBASIC12.03□□□□□ -0.48
AP3S2P59780 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.03□□□□□ -0.48
AP3S2P59780 CNN2P2-201ENST00000443536 909 ntBASIC12.03□□□□□ -0.48
AP3S2P59780 CNN2P3-201ENST00000450201 906 ntBASIC12.03□□□□□ -0.48
AP3S2P59780 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.03□□□□□ -0.48
AP3S2P59780 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.03□□□□□ -0.48
AP3S2P59780 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.03□□□□□ -0.48
AP3S2P59780 AL136317.3-201ENST00000618497 906 ntBASIC12.03□□□□□ -0.48
AP3S2P59780 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
AP3S2P59780 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
AP3S2P59780 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.03□□□□□ -0.48
AP3S2P59780 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms