Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AC098935.1-201ENST00000446057 611 ntBASIC14.85□□□□□ -0.03
CACNA2D1P54289 RN7SL788P-201ENST00000460504 316 ntBASIC14.85□□□□□ -0.03
CACNA2D1P54289 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.85□□□□□ -0.03
CACNA2D1P54289 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA2D1P54289 AP002803.1-201ENST00000528836 498 ntBASIC14.85□□□□□ -0.03
CACNA2D1P54289 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA2D1P54289 AC138701.2-201ENST00000553634 226 ntBASIC14.85□□□□□ -0.03
CACNA2D1P54289 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.85□□□□□ -0.03
CACNA2D1P54289 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.85□□□□□ -0.03
CACNA2D1P54289 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.85□□□□□ -0.03
CACNA2D1P54289 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA2D1P54289 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CACNA2D1P54289 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA2D1P54289 TEKT4P2-202ENST00000559466 1312 ntBASIC14.85□□□□□ -0.03
CACNA2D1P54289 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA2D1P54289 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.85□□□□□ -0.03
CACNA2D1P54289 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA2D1P54289 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.85□□□□□ -0.03
CACNA2D1P54289 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA2D1P54289 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA2D1P54289 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA2D1P54289 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA2D1P54289 AL365181.3-201ENST00000605886 3222 ntBASIC14.85□□□□□ -0.03
CACNA2D1P54289 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA2D1P54289 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 SCARNA12-201ENST00000459155 270 ntBASIC14.84□□□□□ -0.03
CACNA2D1P54289 RPL18AP3-201ENST00000462885 528 ntBASIC14.84□□□□□ -0.03
CACNA2D1P54289 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 TMCO5B-205ENST00000530020 894 ntBASIC14.84□□□□□ -0.03
CACNA2D1P54289 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 IQSEC3P1-201ENST00000538799 536 ntBASIC14.84□□□□□ -0.03
CACNA2D1P54289 NPM1P43-201ENST00000558669 786 ntBASIC14.84□□□□□ -0.03
CACNA2D1P54289 MIR3180-2-201ENST00000581748 88 ntBASIC14.84□□□□□ -0.03
CACNA2D1P54289 MIR2392-201ENST00000584881 84 ntBASIC14.84□□□□□ -0.03
CACNA2D1P54289 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.84□□□□□ -0.03
CACNA2D1P54289 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA2D1P54289 AC015909.5-201ENST00000624336 2266 ntBASIC14.83□□□□□ -0.03
CACNA2D1P54289 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.83□□□□□ -0.03
CACNA2D1P54289 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CACNA2D1P54289 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CACNA2D1P54289 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.83□□□□□ -0.03
CACNA2D1P54289 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CACNA2D1P54289 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CACNA2D1P54289 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CACNA2D1P54289 RCC2P1-201ENST00000452257 1476 ntBASIC14.83□□□□□ -0.03
CACNA2D1P54289 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.83□□□□□ -0.03
CACNA2D1P54289 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.83□□□□□ -0.04
CACNA2D1P54289 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.83□□□□□ -0.04
CACNA2D1P54289 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CACNA2D1P54289 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.83□□□□□ -0.04
CACNA2D1P54289 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.83□□□□□ -0.04
CACNA2D1P54289 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.83□□□□□ -0.04
CACNA2D1P54289 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.83□□□□□ -0.04
CACNA2D1P54289 HERC2P11-201ENST00000562845 725 ntBASIC14.83□□□□□ -0.04
CACNA2D1P54289 AC100756.2-201ENST00000569537 736 ntBASIC14.83□□□□□ -0.04
CACNA2D1P54289 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.83□□□□□ -0.04
CACNA2D1P54289 AC007952.4-201ENST00000573866 637 ntBASIC14.83□□□□□ -0.04
CACNA2D1P54289 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.83□□□□□ -0.04
CACNA2D1P54289 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms