Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SOX2P48431 AC025183.3-201ENST00000623526 1482 ntBASIC12.39□□□□□ -0.43
SOX2P48431 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SOX2P48431 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SOX2P48431 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SOX2P48431 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SOX2P48431 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 AP003969.2-201ENST00000623739 2275 ntBASIC12.39□□□□□ -0.43
SOX2P48431 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.39□□□□□ -0.43
SOX2P48431 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SOX2P48431 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.38□□□□□ -0.43
SOX2P48431 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SOX2P48431 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SOX2P48431 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SOX2P48431 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.38□□□□□ -0.43
SOX2P48431 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.38□□□□□ -0.43
SOX2P48431 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 CICP1-201ENST00000416803 2410 ntBASIC12.38□□□□□ -0.43
SOX2P48431 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.38□□□□□ -0.43
SOX2P48431 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.38□□□□□ -0.43
SOX2P48431 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
SOX2P48431 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.38□□□□□ -0.43
SOX2P48431 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.38□□□□□ -0.43
SOX2P48431 BCRP1-201ENST00000444246 691 ntBASIC12.38□□□□□ -0.43
SOX2P48431 HIST2H2BB-201ENST00000449108 381 ntBASIC12.38□□□□□ -0.43
SOX2P48431 AC007389.4-201ENST00000454674 793 ntBASIC12.38□□□□□ -0.43
SOX2P48431 RN7SL752P-201ENST00000463779 287 ntBASIC12.38□□□□□ -0.43
SOX2P48431 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.38□□□□□ -0.43
SOX2P48431 AL022328.1-201ENST00000610050 478 ntBASIC12.38□□□□□ -0.43
SOX2P48431 AC090386.2-201ENST00000623010 1039 ntBASIC12.38□□□□□ -0.43
SOX2P48431 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.38□□□□□ -0.43
SOX2P48431 AC022497.1-201ENST00000624916 3691 ntBASIC12.38□□□□□ -0.43
SOX2P48431 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.38□□□□□ -0.43
SOX2P48431 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.38□□□□□ -0.43
SOX2P48431 AC073862.5-201ENST00000624129 2027 ntBASIC12.38□□□□□ -0.43
SOX2P48431 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.38□□□□□ -0.43
SOX2P48431 AC104758.3-203ENST00000562938 2123 ntBASIC12.38□□□□□ -0.43
SOX2P48431 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SOX2P48431 AC244394.1-201ENST00000435000 1665 ntBASIC12.38□□□□□ -0.43
SOX2P48431 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.38□□□□□ -0.43
SOX2P48431 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SOX2P48431 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.38□□□□□ -0.43
SOX2P48431 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SOX2P48431 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SOX2P48431 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.37□□□□□ -0.43
SOX2P48431 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SOX2P48431 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SOX2P48431 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.37□□□□□ -0.43
SOX2P48431 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 LINC01165-201ENST00000445190 1623 ntBASIC12.37□□□□□ -0.43
SOX2P48431 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.37□□□□□ -0.43
SOX2P48431 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 AC022400.8-201ENST00000623453 3599 ntBASIC12.37□□□□□ -0.43
SOX2P48431 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.37□□□□□ -0.43
SOX2P48431 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.37□□□□□ -0.43
SOX2P48431 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SOX2P48431 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SOX2P48431 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.37□□□□□ -0.43
SOX2P48431 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms