Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX5P48382 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX5P48382 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX5P48382 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX5P48382 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
RFX5P48382 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX5P48382 AC067930.6-201ENST00000623257 4947 ntBASIC16.88■□□□□ 0.29
RFX5P48382 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RFX5P48382 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RFX5P48382 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX5P48382 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX5P48382 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX5P48382 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RFX5P48382 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX5P48382 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RFX5P48382 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RFX5P48382 AP000354.1-201ENST00000396982 456 ntBASIC16.88■□□□□ 0.29
RFX5P48382 SNORD23-201ENST00000408876 110 ntBASIC16.88■□□□□ 0.29
RFX5P48382 PGK1P2-201ENST00000431702 1214 ntBASIC16.88■□□□□ 0.29
RFX5P48382 BPIFB5P-201ENST00000457066 1099 ntBASIC16.88■□□□□ 0.29
RFX5P48382 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX5P48382 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX5P48382 GOLGA2P7-209ENST00000560408 745 ntBASIC16.88■□□□□ 0.29
RFX5P48382 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.88■□□□□ 0.29
RFX5P48382 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC16.88■□□□□ 0.29
RFX5P48382 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC16.88■□□□□ 0.29
RFX5P48382 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX5P48382 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.88■□□□□ 0.29
RFX5P48382 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.88■□□□□ 0.29
RFX5P48382 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX5P48382 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RFX5P48382 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX5P48382 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RFX5P48382 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX5P48382 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RFX5P48382 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RFX5P48382 AL358781.1-202ENST00000321081 1360 ntBASIC16.88■□□□□ 0.29
RFX5P48382 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX5P48382 AC010327.5-201ENST00000586923 3061 ntBASIC16.88■□□□□ 0.29
RFX5P48382 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX5P48382 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX5P48382 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RFX5P48382 AC012531.1-201ENST00000562848 2680 ntBASIC16.87■□□□□ 0.29
RFX5P48382 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC16.87■□□□□ 0.29
RFX5P48382 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX5P48382 GBAP1-208ENST00000566701 1546 ntBASIC16.87■□□□□ 0.29
RFX5P48382 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RFX5P48382 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC16.87■□□□□ 0.29
RFX5P48382 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX5P48382 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX5P48382 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.87■□□□□ 0.29
RFX5P48382 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RFX5P48382 AC022080.1-201ENST00000366255 781 ntBASIC16.87■□□□□ 0.29
RFX5P48382 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX5P48382 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.87■□□□□ 0.29
RFX5P48382 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC16.87■□□□□ 0.29
RFX5P48382 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RFX5P48382 AC092903.1-201ENST00000466506 262 ntBASIC16.87■□□□□ 0.29
RFX5P48382 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.87■□□□□ 0.29
RFX5P48382 RN7SL128P-201ENST00000467883 305 ntBASIC16.87■□□□□ 0.29
RFX5P48382 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.87■□□□□ 0.29
RFX5P48382 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
RFX5P48382 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.87■□□□□ 0.29
RFX5P48382 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.87■□□□□ 0.29
RFX5P48382 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.87■□□□□ 0.29
RFX5P48382 C2orf69P1-201ENST00000563532 1093 ntBASIC16.87■□□□□ 0.29
RFX5P48382 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.87■□□□□ 0.29
RFX5P48382 AC005777.1-201ENST00000588332 187 ntBASIC16.87■□□□□ 0.29
RFX5P48382 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RFX5P48382 AC006483.2-201ENST00000609813 515 ntBASIC16.87■□□□□ 0.29
RFX5P48382 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.87■□□□□ 0.29
RFX5P48382 Z82244.1-201ENST00000631502 840 ntBASIC16.87■□□□□ 0.29
RFX5P48382 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.87■□□□□ 0.29
RFX5P48382 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX5P48382 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX5P48382 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX5P48382 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RFX5P48382 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX5P48382 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX5P48382 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RFX5P48382 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX5P48382 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms