Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.78□□□□□ -0.04
BRCC3P46736 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.78□□□□□ -0.04
BRCC3P46736 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.78□□□□□ -0.04
BRCC3P46736 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.78□□□□□ -0.04
BRCC3P46736 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 AC138466.4-201ENST00000623965 852 ntBASIC14.78□□□□□ -0.04
BRCC3P46736 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.78□□□□□ -0.04
BRCC3P46736 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.78□□□□□ -0.04
BRCC3P46736 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
BRCC3P46736 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 AL009178.2-201ENST00000597278 2719 ntBASIC14.78□□□□□ -0.04
BRCC3P46736 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.78□□□□□ -0.04
BRCC3P46736 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BRCC3P46736 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRCC3P46736 FAM45BP-202ENST00000592932 1624 ntBASIC14.77□□□□□ -0.04
BRCC3P46736 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRCC3P46736 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRCC3P46736 AL672207.1-201ENST00000328462 1570 ntBASIC14.77□□□□□ -0.04
BRCC3P46736 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRCC3P46736 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRCC3P46736 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
BRCC3P46736 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BRCC3P46736 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
BRCC3P46736 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BRCC3P46736 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRCC3P46736 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
BRCC3P46736 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
BRCC3P46736 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
BRCC3P46736 AP000354.1-201ENST00000396982 456 ntBASIC14.77□□□□□ -0.05
BRCC3P46736 ABCD1P4-201ENST00000399687 604 ntBASIC14.77□□□□□ -0.05
BRCC3P46736 ACTBP14-201ENST00000411655 1089 ntBASIC14.77□□□□□ -0.05
BRCC3P46736 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.77□□□□□ -0.05
BRCC3P46736 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
BRCC3P46736 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 GULOP-201ENST00000454030 748 ntBASIC14.77□□□□□ -0.05
BRCC3P46736 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC14.77□□□□□ -0.05
BRCC3P46736 RN7SL494P-201ENST00000461517 304 ntBASIC14.77□□□□□ -0.05
BRCC3P46736 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
BRCC3P46736 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.77□□□□□ -0.05
BRCC3P46736 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.77□□□□□ -0.05
BRCC3P46736 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.77□□□□□ -0.05
BRCC3P46736 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.77□□□□□ -0.05
BRCC3P46736 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.77□□□□□ -0.05
BRCC3P46736 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
BRCC3P46736 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
BRCC3P46736 MIR8071-1-201ENST00000616769 65 ntBASIC14.77□□□□□ -0.05
BRCC3P46736 MIR8071-2-201ENST00000616772 65 ntBASIC14.77□□□□□ -0.05
BRCC3P46736 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
BRCC3P46736 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
BRCC3P46736 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
BRCC3P46736 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 AC040160.2-201ENST00000623816 1675 ntBASIC14.77□□□□□ -0.05
BRCC3P46736 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
BRCC3P46736 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 SNX18-202ENST00000343017 3140 ntBASIC14.77□□□□□ -0.05
BRCC3P46736 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRCC3P46736 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.77□□□□□ -0.05
BRCC3P46736 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC14.76□□□□□ -0.05
BRCC3P46736 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
BRCC3P46736 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.76□□□□□ -0.05
BRCC3P46736 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
BRCC3P46736 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
BRCC3P46736 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 AC106827.1-201ENST00000366454 431 ntBASIC14.76□□□□□ -0.05
BRCC3P46736 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCC3P46736 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms