Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RN7SL718P-201ENST00000581254 303 ntBASIC17.38■□□□□ 0.37
COL15A1P39059 AC123912.6-201ENST00000612657 315 ntBASIC17.38■□□□□ 0.37
COL15A1P39059 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
COL15A1P39059 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC17.38■□□□□ 0.37
COL15A1P39059 AC020904.3-201ENST00000624199 442 ntBASIC17.38■□□□□ 0.37
COL15A1P39059 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC17.38■□□□□ 0.37
COL15A1P39059 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
COL15A1P39059 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
COL15A1P39059 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
COL15A1P39059 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC17.37■□□□□ 0.37
COL15A1P39059 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 AC040160.2-201ENST00000623816 1675 ntBASIC17.37■□□□□ 0.37
COL15A1P39059 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC17.37■□□□□ 0.37
COL15A1P39059 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC17.37■□□□□ 0.37
COL15A1P39059 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC17.37■□□□□ 0.37
COL15A1P39059 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC17.37■□□□□ 0.37
COL15A1P39059 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC17.37■□□□□ 0.37
COL15A1P39059 AC015818.1-201ENST00000451011 244 ntBASIC17.37■□□□□ 0.37
COL15A1P39059 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC17.37■□□□□ 0.37
COL15A1P39059 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC17.37■□□□□ 0.37
COL15A1P39059 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC17.37■□□□□ 0.37
COL15A1P39059 AC010202.1-201ENST00000551181 405 ntBASIC17.37■□□□□ 0.37
COL15A1P39059 NEK4P3-201ENST00000604859 544 ntBASIC17.37■□□□□ 0.37
COL15A1P39059 AC090510.3-201ENST00000615831 821 ntBASIC17.37■□□□□ 0.37
COL15A1P39059 AC137723.2-201ENST00000623540 398 ntBASIC17.37■□□□□ 0.37
COL15A1P39059 AL357143.1-203ENST00000639750 881 ntBASIC17.37■□□□□ 0.37
COL15A1P39059 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC17.37■□□□□ 0.37
COL15A1P39059 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COL15A1P39059 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COL15A1P39059 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COL15A1P39059 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC17.37■□□□□ 0.37
COL15A1P39059 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL15A1P39059 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC17.37■□□□□ 0.37
COL15A1P39059 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.36■□□□□ 0.37
COL15A1P39059 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
COL15A1P39059 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
COL15A1P39059 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.36■□□□□ 0.37
COL15A1P39059 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
COL15A1P39059 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
COL15A1P39059 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC17.36■□□□□ 0.37
COL15A1P39059 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC17.36■□□□□ 0.37
COL15A1P39059 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
COL15A1P39059 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC17.36■□□□□ 0.37
COL15A1P39059 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC17.36■□□□□ 0.37
COL15A1P39059 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 HNRNPA3P12-201ENST00000437410 1063 ntBASIC17.36■□□□□ 0.37
COL15A1P39059 TREX1-203ENST00000456089 629 ntTSL 3 BASIC17.36■□□□□ 0.37
COL15A1P39059 OR4A49P-201ENST00000527050 632 ntBASIC17.36■□□□□ 0.37
COL15A1P39059 METTL7AP1-201ENST00000547343 496 ntBASIC17.36■□□□□ 0.37
COL15A1P39059 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC17.36■□□□□ 0.37
COL15A1P39059 MIR3940-201ENST00000579148 102 ntBASIC17.36■□□□□ 0.37
COL15A1P39059 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC17.36■□□□□ 0.37
COL15A1P39059 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 AC245369.7-201ENST00000631386 350 ntBASIC17.36■□□□□ 0.37
COL15A1P39059 AC110057.1-201ENST00000636031 898 ntBASIC17.36■□□□□ 0.37
COL15A1P39059 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.36■□□□□ 0.37
COL15A1P39059 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
COL15A1P39059 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC17.36■□□□□ 0.37
COL15A1P39059 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC17.36■□□□□ 0.37
COL15A1P39059 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
COL15A1P39059 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL15A1P39059 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
COL15A1P39059 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 AF013593.1-201ENST00000458074 1487 ntBASIC17.35■□□□□ 0.37
COL15A1P39059 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL15A1P39059 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms