Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.01□□□□□ -0.49
CCL1P22362 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.01□□□□□ -0.49
CCL1P22362 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.01□□□□□ -0.49
CCL1P22362 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.01□□□□□ -0.49
CCL1P22362 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.01□□□□□ -0.49
CCL1P22362 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CCL1P22362 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
CCL1P22362 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
CCL1P22362 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.01□□□□□ -0.49
CCL1P22362 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.01□□□□□ -0.49
CCL1P22362 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.01□□□□□ -0.49
CCL1P22362 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.01□□□□□ -0.49
CCL1P22362 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.01□□□□□ -0.49
CCL1P22362 TBC1D27-202ENST00000424239 1573 ntBASIC12.01□□□□□ -0.49
CCL1P22362 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCL1P22362 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
CCL1P22362 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CCL1P22362 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CCL1P22362 PCDHA5-203ENST00000614258 4248 ntBASIC12□□□□□ -0.49
CCL1P22362 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 AC040160.2-201ENST00000623816 1675 ntBASIC12□□□□□ -0.49
CCL1P22362 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12□□□□□ -0.49
CCL1P22362 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CCL1P22362 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
CCL1P22362 PCDHB18P-202ENST00000526308 3197 ntBASIC12□□□□□ -0.49
CCL1P22362 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12□□□□□ -0.49
CCL1P22362 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12□□□□□ -0.49
CCL1P22362 CICP9-201ENST00000444451 1913 ntBASIC12□□□□□ -0.49
CCL1P22362 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CCL1P22362 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12□□□□□ -0.49
CCL1P22362 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CCL1P22362 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CCL1P22362 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 KRT17P5-201ENST00000332088 839 ntBASIC12□□□□□ -0.49
CCL1P22362 AC239868.1-201ENST00000369385 493 ntBASIC12□□□□□ -0.49
CCL1P22362 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12□□□□□ -0.49
CCL1P22362 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12□□□□□ -0.49
CCL1P22362 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12□□□□□ -0.49
CCL1P22362 COQ10BP2-201ENST00000513804 724 ntBASIC12□□□□□ -0.49
CCL1P22362 ALG1L13P-202ENST00000519320 584 ntBASIC12□□□□□ -0.49
CCL1P22362 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CCL1P22362 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12□□□□□ -0.49
CCL1P22362 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12□□□□□ -0.49
CCL1P22362 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12□□□□□ -0.49
CCL1P22362 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12□□□□□ -0.49
CCL1P22362 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12□□□□□ -0.49
CCL1P22362 AL133467.4-201ENST00000602953 725 ntBASIC12□□□□□ -0.49
CCL1P22362 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12□□□□□ -0.49
CCL1P22362 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12□□□□□ -0.49
CCL1P22362 AL008638.5-201ENST00000623814 1298 ntBASIC12□□□□□ -0.49
CCL1P22362 GARS-210ENST00000627489 324 ntTSL 4 BASIC12□□□□□ -0.49
CCL1P22362 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12□□□□□ -0.49
CCL1P22362 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CCL1P22362 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12□□□□□ -0.49
CCL1P22362 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12□□□□□ -0.49
CCL1P22362 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12□□□□□ -0.49
CCL1P22362 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
CCL1P22362 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12□□□□□ -0.49
CCL1P22362 AL031719.1-201ENST00000623365 2587 ntBASIC12□□□□□ -0.49
CCL1P22362 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12□□□□□ -0.49
CCL1P22362 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CCL1P22362 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CCL1P22362 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12□□□□□ -0.49
CCL1P22362 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12□□□□□ -0.49
CCL1P22362 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CCL1P22362 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms