Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.17□□□□□ -0.14
VCLP18206 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VCLP18206 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VCLP18206 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 FRMPD2B-201ENST00000431305 1347 ntBASIC14.16□□□□□ -0.14
VCLP18206 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VCLP18206 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.16□□□□□ -0.14
VCLP18206 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.16□□□□□ -0.14
VCLP18206 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
VCLP18206 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.16□□□□□ -0.14
VCLP18206 AL596276.2-201ENST00000447525 331 ntBASIC14.16□□□□□ -0.14
VCLP18206 AL353637.1-201ENST00000451571 732 ntBASIC14.16□□□□□ -0.14
VCLP18206 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VCLP18206 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.16□□□□□ -0.14
VCLP18206 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
VCLP18206 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.16□□□□□ -0.14
VCLP18206 AC138627.1-207ENST00000641560 1006 ntBASIC14.16□□□□□ -0.14
VCLP18206 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.16□□□□□ -0.14
VCLP18206 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.16□□□□□ -0.14
VCLP18206 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.16□□□□□ -0.14
VCLP18206 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.16□□□□□ -0.14
VCLP18206 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.16□□□□□ -0.14
VCLP18206 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
VCLP18206 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 AC073869.1-201ENST00000415574 2762 ntBASIC14.16□□□□□ -0.14
VCLP18206 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.16□□□□□ -0.14
VCLP18206 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VCLP18206 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VCLP18206 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
VCLP18206 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VCLP18206 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VCLP18206 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
VCLP18206 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VCLP18206 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
VCLP18206 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.15□□□□□ -0.14
VCLP18206 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.15□□□□□ -0.14
VCLP18206 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.15□□□□□ -0.14
VCLP18206 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.15□□□□□ -0.14
VCLP18206 ISCA2P1-201ENST00000425548 448 ntBASIC14.15□□□□□ -0.14
VCLP18206 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.15□□□□□ -0.14
VCLP18206 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.15□□□□□ -0.14
VCLP18206 IGHJ2P-201ENST00000454480 60 ntBASIC14.15□□□□□ -0.14
VCLP18206 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.15□□□□□ -0.14
VCLP18206 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.15□□□□□ -0.14
VCLP18206 RN7SL530P-201ENST00000485097 298 ntBASIC14.15□□□□□ -0.14
VCLP18206 AC024681.1-201ENST00000521917 487 ntBASIC14.15□□□□□ -0.14
VCLP18206 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.15□□□□□ -0.14
VCLP18206 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.15□□□□□ -0.14
VCLP18206 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.15□□□□□ -0.14
VCLP18206 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.15□□□□□ -0.14
VCLP18206 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.15□□□□□ -0.14
VCLP18206 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.15□□□□□ -0.14
VCLP18206 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.15□□□□□ -0.14
VCLP18206 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VCLP18206 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.15□□□□□ -0.14
VCLP18206 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.15□□□□□ -0.14
VCLP18206 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.15□□□□□ -0.14
VCLP18206 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.15□□□□□ -0.14
VCLP18206 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCLP18206 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms