Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC175P0C221 AL355864.2-201ENST00000447420 863 ntBASIC15.15■□□□□ 0.02
CCDC175P0C221 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC175P0C221 UGT1A2P-201ENST00000454886 866 ntBASIC15.15■□□□□ 0.02
CCDC175P0C221 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.15■□□□□ 0.02
CCDC175P0C221 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC175P0C221 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCDC175P0C221 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC175P0C221 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC175P0C221 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC175P0C221 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCDC175P0C221 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCDC175P0C221 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC175P0C221 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 USP47-202ENST00000339865 7775 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC175P0C221 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCDC175P0C221 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC175P0C221 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC175P0C221 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC175P0C221 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 USO1-201ENST00000264904 4135 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC175P0C221 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC175P0C221 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.14■□□□□ 0.01
CCDC175P0C221 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CCDC175P0C221 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CCDC175P0C221 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC175P0C221 AC112492.5-201ENST00000421897 457 ntBASIC15.14■□□□□ 0.01
CCDC175P0C221 C2orf27AP3-201ENST00000434123 579 ntBASIC15.14■□□□□ 0.01
CCDC175P0C221 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC175P0C221 AL355994.2-201ENST00000447882 704 ntBASIC15.14■□□□□ 0.01
CCDC175P0C221 RNA5SP421-201ENST00000516864 134 ntBASIC15.14■□□□□ 0.01
CCDC175P0C221 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC175P0C221 AP001889.1-201ENST00000525414 633 ntBASIC15.14■□□□□ 0.01
CCDC175P0C221 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.14■□□□□ 0.01
CCDC175P0C221 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC175P0C221 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC175P0C221 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC175P0C221 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 AL354718.3-201ENST00000616414 581 ntBASIC15.14■□□□□ 0.01
CCDC175P0C221 CR382287.1-201ENST00000623954 586 ntBASIC15.14■□□□□ 0.01
CCDC175P0C221 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC175P0C221 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CCDC175P0C221 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC175P0C221 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC175P0C221 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC175P0C221 AC022400.8-201ENST00000623453 3599 ntBASIC15.14■□□□□ 0.01
CCDC175P0C221 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC175P0C221 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC175P0C221 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC175P0C221 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC175P0C221 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms