Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC10.55□□□□□ -0.72
LTAP01374 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC10.55□□□□□ -0.72
LTAP01374 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 AK6-201ENST00000380818 1183 ntTSL 2 BASIC10.55□□□□□ -0.72
LTAP01374 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC10.55□□□□□ -0.72
LTAP01374 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 HNRNPA1P2-207ENST00000432375 960 ntBASIC10.55□□□□□ -0.72
LTAP01374 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC10.55□□□□□ -0.72
LTAP01374 AL590640.2-201ENST00000457038 527 ntBASIC10.55□□□□□ -0.72
LTAP01374 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC10.55□□□□□ -0.72
LTAP01374 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC10.55□□□□□ -0.72
LTAP01374 AC106760.1-201ENST00000508690 800 ntBASIC10.55□□□□□ -0.72
LTAP01374 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC10.55□□□□□ -0.72
LTAP01374 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC10.55□□□□□ -0.72
LTAP01374 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC10.55□□□□□ -0.72
LTAP01374 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LTAP01374 GNRHR2-203ENST00000581100 1187 ntBASIC10.55□□□□□ -0.72
LTAP01374 ZACNP1-201ENST00000612259 710 ntBASIC10.55□□□□□ -0.72
LTAP01374 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LTAP01374 AL033527.5-201ENST00000641382 801 ntBASIC10.55□□□□□ -0.72
LTAP01374 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 PPP1R26P2-201ENST00000611403 3595 ntBASIC10.55□□□□□ -0.72
LTAP01374 AC022400.8-201ENST00000623453 3599 ntBASIC10.55□□□□□ -0.72
LTAP01374 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
LTAP01374 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 LINC00563-201ENST00000566370 1400 ntBASIC10.55□□□□□ -0.72
LTAP01374 DDX12P-201ENST00000432996 2947 ntBASIC10.55□□□□□ -0.72
LTAP01374 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC10.55□□□□□ -0.72
LTAP01374 AC018445.4-201ENST00000624066 2291 ntBASIC10.55□□□□□ -0.72
LTAP01374 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC10.55□□□□□ -0.72
LTAP01374 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
LTAP01374 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC10.55□□□□□ -0.72
LTAP01374 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC10.55□□□□□ -0.72
LTAP01374 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
LTAP01374 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC10.55□□□□□ -0.72
LTAP01374 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
LTAP01374 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LTAP01374 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC10.54□□□□□ -0.72
LTAP01374 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
LTAP01374 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
LTAP01374 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 BX324167.2-201ENST00000623717 3316 ntBASIC10.54□□□□□ -0.72
LTAP01374 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
LTAP01374 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LTAP01374 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC10.54□□□□□ -0.72
LTAP01374 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC10.54□□□□□ -0.72
LTAP01374 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
LTAP01374 MPV17-205ENST00000402310 906 ntTSL 5 BASIC10.54□□□□□ -0.72
LTAP01374 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC10.54□□□□□ -0.72
LTAP01374 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC10.54□□□□□ -0.72
LTAP01374 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LTAP01374 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC10.54□□□□□ -0.72
LTAP01374 RGS5-214ENST00000429865 754 ntTSL 3 BASIC10.54□□□□□ -0.72
LTAP01374 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC10.54□□□□□ -0.72
LTAP01374 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC10.54□□□□□ -0.72
LTAP01374 AL355994.2-201ENST00000447882 704 ntBASIC10.54□□□□□ -0.72
LTAP01374 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LTAP01374 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms