Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 AL590824.1-201ENST00000403828 1349 ntBASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.8□□□□□ -0.36
NPIPA3F8WFD2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 PTPRVP-205ENST00000641549 5067 ntBASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 LINC02486-201ENST00000604157 3000 ntBASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 AL354861.1-201ENST00000445213 355 ntBASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 RN7SL818P-201ENST00000485099 259 ntBASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 CR383656.3-201ENST00000551315 183 ntBASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 RN7SL725P-201ENST00000606439 259 ntBASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 LINC00115-201ENST00000473798 1317 ntBASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 AC073957.3-201ENST00000609998 6758 ntBASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 AL359881.3-201ENST00000602640 1721 ntBASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 LINC01815-202ENST00000641468 1409 ntBASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NPIPA3F8WFD2 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 KRT8P24-201ENST00000560290 1559 ntBASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 AC067931.2-201ENST00000623655 2003 ntBASIC12.78□□□□□ -0.36
NPIPA3F8WFD2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms