Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.81□□□□□ -0.52
KCNIP3Q9Y2W7 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 CICP1-201ENST00000416803 2410 ntBASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 AC093433.1-201ENST00000458048 571 ntBASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 AL391280.1-201ENST00000506969 1062 ntBASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 AL390754.1-201ENST00000619088 582 ntBASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 AC134684.3-201ENST00000641758 218 ntBASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.8□□□□□ -0.52
KCNIP3Q9Y2W7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 PCDHB19P-202ENST00000625133 2914 ntBASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 TPM3P8-201ENST00000330554 643 ntBASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AC004967.1-201ENST00000453589 447 ntBASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AC004890.2-204ENST00000481968 304 ntBASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
KCNIP3Q9Y2W7 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms