Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AOC4P-203ENST00000566825 2289 ntBASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 FAM86GP-201ENST00000448322 971 ntBASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AL035414.1-201ENST00000451327 857 ntBASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 CDC23-208ENST00000505120 455 ntTSL 3 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AL512310.5-201ENST00000551999 515 ntBASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AC106820.3-201ENST00000561653 397 ntBASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AC093726.1-201ENST00000608064 963 ntBASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AC021016.3-201ENST00000608367 477 ntBASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AL390754.1-201ENST00000619088 582 ntBASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AC027601.3-201ENST00000622907 509 ntBASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 LAP3P2-201ENST00000454686 1454 ntBASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 AP000347.1-202ENST00000435868 847 ntBASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 RN7SL48P-201ENST00000579283 293 ntBASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms