Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 USP17L6P-201ENST00000382470 1197 ntBASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 AC138701.2-201ENST00000553634 226 ntBASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 MIR4649-201ENST00000582839 64 ntBASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 AC104506.1-201ENST00000609247 429 ntBASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 AC009084.3-201ENST00000623356 437 ntBASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 REXO1L1P-201ENST00000379010 6598 ntBASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 AC010327.5-201ENST00000586923 3061 ntBASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA1Q9UND3 LAP3P2-201ENST00000454686 1454 ntBASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 AC090643.2-201ENST00000623442 2029 ntBASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 AC018463.1-201ENST00000456674 917 ntBASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 RPL18AP3-201ENST00000462885 528 ntBASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 ORAOV1P1-201ENST00000503108 395 ntBASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms