Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.24□□□□□ -0.13
HACD3Q9P035 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
HACD3Q9P035 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.24□□□□□ -0.13
HACD3Q9P035 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.24□□□□□ -0.13
HACD3Q9P035 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC14.24□□□□□ -0.13
HACD3Q9P035 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HACD3Q9P035 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
HACD3Q9P035 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.24□□□□□ -0.13
HACD3Q9P035 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.24□□□□□ -0.13
HACD3Q9P035 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
HACD3Q9P035 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 ISCA2P1-201ENST00000425548 448 ntBASIC14.24□□□□□ -0.13
HACD3Q9P035 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.24□□□□□ -0.13
HACD3Q9P035 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.24□□□□□ -0.13
HACD3Q9P035 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.24□□□□□ -0.13
HACD3Q9P035 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.24□□□□□ -0.13
HACD3Q9P035 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.24□□□□□ -0.13
HACD3Q9P035 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.24□□□□□ -0.13
HACD3Q9P035 AC244093.1-201ENST00000610837 814 ntBASIC14.24□□□□□ -0.13
HACD3Q9P035 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.24□□□□□ -0.13
HACD3Q9P035 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.24□□□□□ -0.13
HACD3Q9P035 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.24□□□□□ -0.13
HACD3Q9P035 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HACD3Q9P035 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HACD3Q9P035 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HACD3Q9P035 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HACD3Q9P035 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.23□□□□□ -0.13
HACD3Q9P035 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.23□□□□□ -0.13
HACD3Q9P035 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 CYP46A4P-201ENST00000414953 267 ntBASIC14.23□□□□□ -0.13
HACD3Q9P035 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 CALR4P-201ENST00000431943 946 ntBASIC14.23□□□□□ -0.13
HACD3Q9P035 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.23□□□□□ -0.13
HACD3Q9P035 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.23□□□□□ -0.13
HACD3Q9P035 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
HACD3Q9P035 AL161670.2-201ENST00000557650 1227 ntBASIC14.23□□□□□ -0.13
HACD3Q9P035 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.23□□□□□ -0.13
HACD3Q9P035 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 AC103810.3-201ENST00000583567 96 ntBASIC14.23□□□□□ -0.13
HACD3Q9P035 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.23□□□□□ -0.13
HACD3Q9P035 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.23□□□□□ -0.13
HACD3Q9P035 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.23□□□□□ -0.13
HACD3Q9P035 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC14.23□□□□□ -0.13
HACD3Q9P035 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.23□□□□□ -0.13
HACD3Q9P035 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HACD3Q9P035 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.23□□□□□ -0.13
HACD3Q9P035 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HACD3Q9P035 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
HACD3Q9P035 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
HACD3Q9P035 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HACD3Q9P035 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HACD3Q9P035 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
HACD3Q9P035 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms