Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 DGCR9-201ENST00000609630 2415 ntBASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AL139158.3-201ENST00000641212 1562 ntBASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AC026316.1-201ENST00000398900 414 ntBASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AC073869.2-201ENST00000417338 1026 ntBASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 RPSAP15-201ENST00000448168 861 ntBASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AC019193.1-201ENST00000506678 823 ntBASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 RTN3P1-201ENST00000536295 711 ntBASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 RN7SL455P-201ENST00000580629 282 ntBASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 AC130686.1-201ENST00000622936 2466 ntBASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CUEDC1Q9NWM3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 AL356585.2-201ENST00000625078 2396 ntBASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 AC073869.1-201ENST00000415574 2762 ntBASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.61□□□□□ -0.23
CUEDC1Q9NWM3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms