Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 AL109615.3-201ENST00000422059 2232 ntTSL 2 BASIC6.38□□□□□ -1.39
PRAC1Q96KF2 AC099489.3-201ENST00000572950 2279 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PRAC1Q96KF2 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
PRAC1Q96KF2 AC060780.1-203ENST00000634503 2406 ntTSL 3 BASIC6.38□□□□□ -1.39
PRAC1Q96KF2 NMT2-201ENST00000378150 2457 ntTSL 2 BASIC6.38□□□□□ -1.39
PRAC1Q96KF2 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PRAC1Q96KF2 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PRAC1Q96KF2 RAP1GAP-206ENST00000374765 3271 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PRAC1Q96KF2 SEMA4A-204ENST00000368285 3300 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PRAC1Q96KF2 C9orf85-206ENST00000486911 3321 ntTSL 5 BASIC6.38□□□□□ -1.39
PRAC1Q96KF2 BRF1-204ENST00000392557 3579 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PRAC1Q96KF2 EML1-202ENST00000327921 3715 ntTSL 2 BASIC6.38□□□□□ -1.39
PRAC1Q96KF2 AC068448.1-201ENST00000623902 3925 ntBASIC6.38□□□□□ -1.39
PRAC1Q96KF2 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 ERBB3-201ENST00000267101 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 PSMF1-203ENST00000335877 4290 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 RNF40-202ENST00000357890 3917 ntTSL 2 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 SLC38A11-201ENST00000303735 3737 ntTSL 2 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 TUT1-205ENST00000476907 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 PRPF4-202ENST00000374199 3212 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 HMGN3-AS1-201ENST00000604516 2946 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 AP4S1-201ENST00000216366 2256 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 POM121L1P-201ENST00000402027 1934 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 HSD3B2-201ENST00000369416 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 AC099494.3-201ENST00000623645 1722 ntBASIC6.37□□□□□ -1.39
PRAC1Q96KF2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 ASB9-202ENST00000380485 1652 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 DCTN1-204ENST00000409438 4145 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 ACAD10-201ENST00000313698 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 AL035696.2-201ENST00000407941 709 ntBASIC6.37□□□□□ -1.39
PRAC1Q96KF2 RNU6-233P-201ENST00000410845 141 ntBASIC6.37□□□□□ -1.39
PRAC1Q96KF2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 Z85996.1-201ENST00000494644 937 ntBASIC6.37□□□□□ -1.39
PRAC1Q96KF2 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 AP000894.1-201ENST00000584430 520 ntBASIC6.37□□□□□ -1.39
PRAC1Q96KF2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 AC027644.3-201ENST00000607978 557 ntBASIC6.37□□□□□ -1.39
PRAC1Q96KF2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 RIMBP2-202ENST00000535703 3685 ntTSL 5 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 LINC00661-204ENST00000549354 3340 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 LINC00664-202ENST00000596718 3029 ntTSL 5 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 FBXO8-201ENST00000393674 2577 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 AC024896.1-201ENST00000500632 2549 ntTSL 5 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 STXBP1-218ENST00000637173 4193 ntTSL 5 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 AC004584.3-201ENST00000572877 2356 ntBASIC6.37□□□□□ -1.39
PRAC1Q96KF2 CASP7-212ENST00000621607 2378 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 HSPA8-218ENST00000532636 2306 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 ZMIZ2-203ENST00000413916 3773 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 SIRPB1-202ENST00000279477 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 ZNF638-204ENST00000410075 3518 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRAC1Q96KF2 FAM53C-201ENST00000239906 4377 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PRAC1Q96KF2 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PRAC1Q96KF2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PRAC1Q96KF2 POLR2M-201ENST00000299638 4199 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PRAC1Q96KF2 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
PRAC1Q96KF2 C1RL-AS1-205ENST00000541775 5272 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PRAC1Q96KF2 TRPV3-205ENST00000572519 2937 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PRAC1Q96KF2 NEFM-201ENST00000221166 4020 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PRAC1Q96KF2 EFR3B-204ENST00000403714 7434 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PRAC1Q96KF2 AP000997.2-201ENST00000564619 8400 ntBASIC6.36□□□□□ -1.39
PRAC1Q96KF2 PCID2-206ENST00000375479 1671 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PRAC1Q96KF2 HNRNPRP1-201ENST00000453465 1695 ntBASIC6.36□□□□□ -1.39
PRAC1Q96KF2 CYP17A1-207ENST00000639393 1684 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
PRAC1Q96KF2 AC004947.2-201ENST00000623092 2671 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms