RNA–Protein interactions for RNA: ENST00000239906.9

FAM53C-201, Transcript of family with sequence similarity 53 member C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM53C, Length 4,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53C-201ENST00000239906 NISCHQ9Y2I1 1504 aa20.09■□□□□ 0.81
FAM53C-201ENST00000239906 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
FAM53C-201ENST00000239906 SUPT5HO00267 1087 aaKnown RBP18.53■□□□□ 0.56
FAM53C-201ENST00000239906 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.52
FAM53C-201ENST00000239906 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
FAM53C-201ENST00000239906 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
FAM53C-201ENST00000239906 APLP2Q06481 763 aa17.33■□□□□ 0.36
FAM53C-201ENST00000239906 TRIM41Q8WV44 630 aa17.33■□□□□ 0.36
FAM53C-201ENST00000239906 PCGF6Q9BYE7 350 aa17.29■□□□□ 0.36
FAM53C-201ENST00000239906 TTBK1Q5TCY1 1321 aaPredicted RBP17.14■□□□□ 0.33
FAM53C-201ENST00000239906 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
FAM53C-201ENST00000239906 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
FAM53C-201ENST00000239906 RANGAP1P46060 587 aaPredicted RBP16.95■□□□□ 0.3
FAM53C-201ENST00000239906 UBTFP17480 764 aaKnown RBP16.91■□□□□ 0.3
FAM53C-201ENST00000239906 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
FAM53C-201ENST00000239906 TRIM26Q12899 539 aaPredicted RBP16.83■□□□□ 0.28
FAM53C-201ENST00000239906 CCER1Q8TC90 406 aaPredicted RBP16.83■□□□□ 0.28
FAM53C-201ENST00000239906 ZCCHC6Q5VYS8 1495 aaKnown RBP16.82■□□□□ 0.28
FAM53C-201ENST00000239906 CCDC180Q9P1Z9 1646 aa16.76■□□□□ 0.27
FAM53C-201ENST00000239906 ABCC9O60706 1549 aa16.71■□□□□ 0.27
FAM53C-201ENST00000239906 ATP1B4Q9UN42 357 aaPredicted RBP16.69■□□□□ 0.26
FAM53C-201ENST00000239906 PPARGC1BQ86YN6 1023 aaKnown RBP16.68■□□□□ 0.26
FAM53C-201ENST00000239906 CENPBP07199 599 aaPredicted RBP16.66■□□□□ 0.26
FAM53C-201ENST00000239906 HRCP23327 699 aa16.66■□□□□ 0.26
FAM53C-201ENST00000239906 LOC105371045A0A1W2PR82 267 aa16.65■□□□□ 0.26
FAM53C-201ENST00000239906 PABPN1Q86U42 306 aaKnown RBP eCLIP16.37■□□□□ 0.21
FAM53C-201ENST00000239906 YTHDC1Q96MU7 727 aaKnown RBP16.36■□□□□ 0.21
FAM53C-201ENST00000239906 ITGAEP38570 1179 aa16.28■□□□□ 0.2
FAM53C-201ENST00000239906 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
FAM53C-201ENST00000239906 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
FAM53C-201ENST00000239906 SCRIBQ14160 1630 aa16.24■□□□□ 0.19
FAM53C-201ENST00000239906 DCAF1Q9Y4B6 1507 aa16.21■□□□□ 0.19
FAM53C-201ENST00000239906 NEFLP07196 543 aa16.17■□□□□ 0.18
FAM53C-201ENST00000239906 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
FAM53C-201ENST00000239906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
FAM53C-201ENST00000239906 ERICH6Q7L0X2 663 aa16.12■□□□□ 0.17
FAM53C-201ENST00000239906 NACADO15069 1562 aa16.08■□□□□ 0.16
FAM53C-201ENST00000239906 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
FAM53C-201ENST00000239906 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
FAM53C-201ENST00000239906 DIEXFQ68CQ4 756 aaKnown RBP15.98■□□□□ 0.15
FAM53C-201ENST00000239906 POLR3GLQ9BT43 218 aa15.94■□□□□ 0.14
FAM53C-201ENST00000239906 FAM50AQ14320 339 aaKnown RBP15.9■□□□□ 0.14
FAM53C-201ENST00000239906 MYT1LQ9UL68 1186 aa15.87■□□□□ 0.13
FAM53C-201ENST00000239906 EEA1Q15075 1411 aa15.86■□□□□ 0.13
FAM53C-201ENST00000239906 MYT1Q01538 1121 aa15.86■□□□□ 0.13
FAM53C-201ENST00000239906 CNGB1Q14028 1251 aaPredicted RBP15.85■□□□□ 0.13
FAM53C-201ENST00000239906 ZNF316A6NFI3 1004 aaPredicted RBP15.78■□□□□ 0.12
FAM53C-201ENST00000239906 BAZ1AQ9NRL2 1556 aaPredicted RBP15.76■□□□□ 0.11
FAM53C-201ENST00000239906 NEUROD1Q13562 356 aa15.73■□□□□ 0.11
FAM53C-201ENST00000239906 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
FAM53C-201ENST00000239906 WRNQ14191 1432 aaPredicted RBP eCLIP15.65■□□□□ 0.1
FAM53C-201ENST00000239906 CDK11AQ9UQ88 783 aaPredicted RBP15.64■□□□□ 0.09
FAM53C-201ENST00000239906 GOLGA3Q08378 1498 aa15.64■□□□□ 0.09
FAM53C-201ENST00000239906 CLIP1P30622 1438 aa15.63■□□□□ 0.09
FAM53C-201ENST00000239906 P3H3Q8IVL6 736 aa15.63■□□□□ 0.09
FAM53C-201ENST00000239906 BAZ1BQ9UIG0 1483 aaKnown RBP15.62■□□□□ 0.09
FAM53C-201ENST00000239906 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
FAM53C-201ENST00000239906 TNIKQ9UKE5 1360 aa15.6■□□□□ 0.09
FAM53C-201ENST00000239906 ANP32CO43423 234 aa15.59■□□□□ 0.09
FAM53C-201ENST00000239906 CEP162Q5TB80 1403 aa15.57■□□□□ 0.08
FAM53C-201ENST00000239906 GTF3C3Q9Y5Q9 886 aa15.57■□□□□ 0.08
FAM53C-201ENST00000239906 FBLN2P98095 1184 aa15.56■□□□□ 0.08
FAM53C-201ENST00000239906 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
FAM53C-201ENST00000239906 DAXXQ9UER7 740 aaPredicted RBP15.52■□□□□ 0.08
FAM53C-201ENST00000239906 MROH2BQ7Z745 1585 aa15.52■□□□□ 0.08
FAM53C-201ENST00000239906 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.07
FAM53C-201ENST00000239906 ZNF326Q5BKZ1 582 aaKnown RBP15.51■□□□□ 0.07
FAM53C-201ENST00000239906 ARID3CA6NKF2 412 aa15.5■□□□□ 0.07
FAM53C-201ENST00000239906 KIF27Q86VH2 1401 aa15.5■□□□□ 0.07
FAM53C-201ENST00000239906 ACIN1Q9UKV3 1341 aaKnown RBP15.49■□□□□ 0.07
FAM53C-201ENST00000239906 CLSPNQ9HAW4 1339 aa15.47■□□□□ 0.07
FAM53C-201ENST00000239906 BCANQ96GW7 911 aa15.45■□□□□ 0.06
FAM53C-201ENST00000239906 TONSLQ96HA7 1378 aa15.44■□□□□ 0.06
FAM53C-201ENST00000239906 MTUS2Q5JR59 1369 aa15.41■□□□□ 0.06
FAM53C-201ENST00000239906 WIZO95785 1651 aa15.4■□□□□ 0.06
FAM53C-201ENST00000239906 CCDC88BA6NC98 1476 aa15.37■□□□□ 0.05
FAM53C-201ENST00000239906 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
FAM53C-201ENST00000239906 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
FAM53C-201ENST00000239906 ZNF777Q9ULD5 760 aaPredicted RBP15.34■□□□□ 0.05
FAM53C-201ENST00000239906 TOP2AP11388 1531 aaKnown RBP15.32■□□□□ 0.04
FAM53C-201ENST00000239906 SOGA1O94964 1423 aa15.29■□□□□ 0.04
FAM53C-201ENST00000239906 CHMP7Q8WUX9 453 aaPredicted RBP15.25■□□□□ 0.03
FAM53C-201ENST00000239906 FHAD1B1AJZ9 1412 aa15.25■□□□□ 0.03
FAM53C-201ENST00000239906 TSPY4P0CV99 314 aa15.24■□□□□ 0.03
FAM53C-201ENST00000239906 TSPY10P0CW01 314 aa15.24■□□□□ 0.03
FAM53C-201ENST00000239906 RTL5Q5HYW3 569 aaPredicted RBP15.23■□□□□ 0.03
FAM53C-201ENST00000239906 DDX10Q13206 875 aaKnown RBP15.22■□□□□ 0.03
FAM53C-201ENST00000239906 VPS8Q8N3P4 1428 aa15.22■□□□□ 0.03
FAM53C-201ENST00000239906 ABCC8Q09428 1581 aa15.21■□□□□ 0.03
FAM53C-201ENST00000239906 CARMIL1Q5VZK9 1371 aa15.21■□□□□ 0.03
FAM53C-201ENST00000239906 CHIC2Q9UKJ5 165 aa15.2■□□□□ 0.02
FAM53C-201ENST00000239906 CUX2O14529 1486 aa15.18■□□□□ 0.02
FAM53C-201ENST00000239906 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
FAM53C-201ENST00000239906 CCNB3Q8WWL7 1395 aa15.15■□□□□ 0.02
FAM53C-201ENST00000239906 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
FAM53C-201ENST00000239906 PLEKHD1A6NEE1 506 aa15.13■□□□□ 0.01
FAM53C-201ENST00000239906 TIMELESSQ9UNS1 1208 aa15.13■□□□□ 0.01
FAM53C-201ENST00000239906 ATAD2BQ9ULI0 1458 aa15.12■□□□□ 0.01
FAM53C-201ENST00000239906 MIER1Q8N108 512 aa15.12■□□□□ 0.01
FAM53C-201ENST00000239906 EIF4G2P78344 907 aaKnown RBP eCLIP15.12■□□□□ 0.018e-7■■■□□ 15.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms