Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 MIR339-201ENST00000362153 94 ntBASIC16.57■□□□□ 0.24
SNED1Q8TER0 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 CRIP1P2-201ENST00000425396 228 ntBASIC16.57■□□□□ 0.24
SNED1Q8TER0 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC16.57■□□□□ 0.24
SNED1Q8TER0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 AC015656.1-201ENST00000624209 3578 ntBASIC16.56■□□□□ 0.24
SNED1Q8TER0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 AL591499.1-201ENST00000307155 1153 ntBASIC16.56■□□□□ 0.24
SNED1Q8TER0 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 SERF2-204ENST00000402131 586 ntTSL 2 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 RBM14-205ENST00000443702 732 ntTSL 3 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 RPSAP16-201ENST00000447583 821 ntBASIC16.56■□□□□ 0.24
SNED1Q8TER0 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 MYL6-215ENST00000549566 685 ntTSL 2 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 CDC37P2-201ENST00000562287 1029 ntBASIC16.56■□□□□ 0.24
SNED1Q8TER0 PCTP-206ENST00000573500 919 ntTSL 3 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 AC061965.1-201ENST00000560524 1465 ntBASIC16.56■□□□□ 0.24
SNED1Q8TER0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC16.56■□□□□ 0.24
SNED1Q8TER0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNED1Q8TER0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNED1Q8TER0 CASP2-203ENST00000392925 616 ntTSL 3 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 RN7SL794P-201ENST00000469816 280 ntBASIC16.55■□□□□ 0.24
SNED1Q8TER0 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 AC090820.1-201ENST00000519722 591 ntBASIC16.55■□□□□ 0.24
SNED1Q8TER0 AC103724.2-201ENST00000520355 476 ntBASIC16.55■□□□□ 0.24
SNED1Q8TER0 SAA2-206ENST00000530400 323 ntTSL 3 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
SNED1Q8TER0 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms