Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 EEF1GP3-201ENST00000421044 1288 ntBASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 AC007690.1-201ENST00000451924 468 ntBASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 FKBP4P1-201ENST00000507284 1347 ntBASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 AC025538.1-201ENST00000510707 1486 ntBASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 AC073488.1-201ENST00000416620 1600 ntBASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ALMS1Q8TCU4 AL049542.1-201ENST00000430231 278 ntBASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 CALM3-206ENST00000594523 540 ntTSL 4 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AC018868.2-201ENST00000559655 1259 ntBASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 UBA3-212ENST00000630585 390 ntTSL 4 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AC113367.3-201ENST00000508316 1912 ntBASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AL049597.1-201ENST00000447415 555 ntBASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 C8orf49-201ENST00000525043 1968 ntBASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 GGT8P-201ENST00000418938 532 ntBASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AKR1C6P-201ENST00000432950 983 ntBASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AADAC-202ENST00000488869 719 ntTSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms