Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC103810.10-201ENST00000606504 343 ntBASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 AC009560.1-201ENST00000620208 434 ntBASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 AC128714.1-201ENST00000637035 887 ntBASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 AC111170.3-201ENST00000624282 2464 ntBASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 AL512430.1-201ENST00000392575 860 ntBASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 AC103592.1-201ENST00000394513 664 ntBASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 AC026316.1-201ENST00000398900 414 ntBASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 AC138894.2-201ENST00000602838 371 ntBASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 BEND3P3-201ENST00000611030 2440 ntBASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 AC006480.2-201ENST00000609770 1337 ntBASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.64□□□□□ -0.07
RFWD3Q6PCD5 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 AC006987.1-201ENST00000413610 527 ntBASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RFWD3Q6PCD5 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms