Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 RN7SL47P-201ENST00000488710 299 ntBASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 MYL6-215ENST00000549566 685 ntTSL 2 BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 AC117500.5-201ENST00000623233 527 ntBASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 HNRNPLP1-201ENST00000421896 1501 ntBASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 AC023794.5-201ENST00000564380 2157 ntBASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 MIR324-201ENST00000362183 83 ntBASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 AL391647.1-201ENST00000395664 511 ntBASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 RPSAP61-201ENST00000412542 878 ntBASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 HMGN1P4-201ENST00000419500 290 ntBASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 PRDX3P2-201ENST00000447051 611 ntBASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 AC104117.1-201ENST00000517817 900 ntBASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 RN7SL202P-201ENST00000584410 262 ntBASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 RPL4P6-201ENST00000438116 1304 ntBASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CDC42BPAQ5VT25 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 AC099343.1-201ENST00000513481 609 ntBASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 AC244097.1-201ENST00000621631 1216 ntBASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 AHCYP7-201ENST00000560847 1308 ntBASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDC42BPAQ5VT25 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 ACTBP9-201ENST00000587663 1099 ntBASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 AC138430.2-201ENST00000624068 504 ntBASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 KRT8P5-201ENST00000592443 1458 ntBASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDC42BPAQ5VT25 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 FTO-214ENST00000636218 2227 ntTSL 5 BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 EGLN3-205ENST00000547327 2849 ntBASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC42BPAQ5VT25 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms