Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM71Q2Q1W2 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC15.08■□□□□ 0
TRIM71Q2Q1W2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM71Q2Q1W2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRIM71Q2Q1W2 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.08■□□□□ 0
TRIM71Q2Q1W2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM71Q2Q1W2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM71Q2Q1W2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM71Q2Q1W2 AC061965.1-201ENST00000560524 1465 ntBASIC15.08■□□□□ 0
TRIM71Q2Q1W2 FAM226B-201ENST00000602508 1490 ntBASIC15.08■□□□□ 0
TRIM71Q2Q1W2 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 AL137784.3-201ENST00000623858 2288 ntBASIC15.07■□□□□ 0
TRIM71Q2Q1W2 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 CCL19-202ENST00000378800 414 ntTSL 2 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 PHBP10-201ENST00000416467 784 ntBASIC15.07■□□□□ 0
TRIM71Q2Q1W2 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 AC027612.2-202ENST00000445955 1199 ntBASIC15.07■□□□□ 0
TRIM71Q2Q1W2 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 MIR2278-201ENST00000516344 96 ntBASIC15.07■□□□□ 0
TRIM71Q2Q1W2 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 BX322534.1-201ENST00000635574 241 ntBASIC15.07■□□□□ 0
TRIM71Q2Q1W2 AC215524.1-201ENST00000635696 241 ntBASIC15.07■□□□□ 0
TRIM71Q2Q1W2 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRIM71Q2Q1W2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 NHP2P1-201ENST00000335274 462 ntBASIC15.06■□□□□ 0
TRIM71Q2Q1W2 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 UROS-201ENST00000368774 744 ntTSL 2 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 OR7E155P-201ENST00000412208 1014 ntBASIC15.06■□□□□ 0
TRIM71Q2Q1W2 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 AC136604.1-202ENST00000425471 771 ntBASIC15.06■□□□□ 0
TRIM71Q2Q1W2 HNRNPA3P6-201ENST00000472163 1006 ntBASIC15.06■□□□□ 0
TRIM71Q2Q1W2 EMC4-208ENST00000559078 599 ntTSL 3 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 MIR3940-201ENST00000579148 102 ntBASIC15.06■□□□□ 0
TRIM71Q2Q1W2 PRMT1P1-201ENST00000604252 1009 ntBASIC15.06■□□□□ 0
TRIM71Q2Q1W2 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 AL591424.3-201ENST00000614278 872 ntBASIC15.06■□□□□ 0
TRIM71Q2Q1W2 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC15.06■□□□□ 0
TRIM71Q2Q1W2 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 AC064850.1-201ENST00000413279 1398 ntBASIC15.06■□□□□ 0
TRIM71Q2Q1W2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM71Q2Q1W2 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms