Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 GUCY2EP-203ENST00000531117 1918 ntBASIC16.3■□□□□ 0.2
CNTNAP1P78357 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP1P78357 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP1P78357 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 AL591499.1-201ENST00000307155 1153 ntBASIC16.29■□□□□ 0.2
CNTNAP1P78357 OR7E12P-201ENST00000344740 973 ntBASIC16.29■□□□□ 0.2
CNTNAP1P78357 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 AC015818.1-201ENST00000451011 244 ntBASIC16.29■□□□□ 0.2
CNTNAP1P78357 JPT1-205ENST00000470924 663 ntTSL 5 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 AC104212.2-201ENST00000478813 628 ntBASIC16.29■□□□□ 0.2
CNTNAP1P78357 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 CCND3P2-201ENST00000579393 537 ntBASIC16.29■□□□□ 0.2
CNTNAP1P78357 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP1P78357 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC16.29■□□□□ 0.2
CNTNAP1P78357 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 HLA-W-207ENST00000439514 771 ntBASIC16.28■□□□□ 0.2
CNTNAP1P78357 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 MIR6165-201ENST00000614803 84 ntBASIC16.28■□□□□ 0.2
CNTNAP1P78357 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 AC061965.1-201ENST00000560524 1465 ntBASIC16.28■□□□□ 0.2
CNTNAP1P78357 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 AC064850.1-201ENST00000413279 1398 ntBASIC16.28■□□□□ 0.2
CNTNAP1P78357 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.28■□□□□ 0.2
CNTNAP1P78357 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.28■□□□□ 0.2
CNTNAP1P78357 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP1P78357 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC16.27■□□□□ 0.2
CNTNAP1P78357 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP1P78357 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms