Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC13.41□□□□□ -0.26
CLDN6P56747 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.41□□□□□ -0.26
CLDN6P56747 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CLDN6P56747 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDN6P56747 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDN6P56747 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
CLDN6P56747 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CLDN6P56747 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CLDN6P56747 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CLDN6P56747 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CLDN6P56747 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN6P56747 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDN6P56747 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN6P56747 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN6P56747 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDN6P56747 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN6P56747 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CLDN6P56747 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN6P56747 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CLDN6P56747 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC13.4□□□□□ -0.26
CLDN6P56747 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CLDN6P56747 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN6P56747 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CLDN6P56747 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.4□□□□□ -0.26
CLDN6P56747 AC092612.1-201ENST00000514501 998 ntBASIC13.4□□□□□ -0.26
CLDN6P56747 AC018846.1-201ENST00000568231 183 ntBASIC13.4□□□□□ -0.26
CLDN6P56747 ANKRD26P1-203ENST00000569528 966 ntBASIC13.4□□□□□ -0.26
CLDN6P56747 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN6P56747 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC13.4□□□□□ -0.26
CLDN6P56747 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC13.4□□□□□ -0.26
CLDN6P56747 AL136982.5-201ENST00000605222 294 ntBASIC13.4□□□□□ -0.26
CLDN6P56747 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN6P56747 PTPN20CP-201ENST00000614090 920 ntBASIC13.4□□□□□ -0.26
CLDN6P56747 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CLDN6P56747 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
CLDN6P56747 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CLDN6P56747 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CLDN6P56747 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CLDN6P56747 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN6P56747 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CLDN6P56747 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CLDN6P56747 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CLDN6P56747 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
CLDN6P56747 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.4□□□□□ -0.27
CLDN6P56747 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.4□□□□□ -0.27
CLDN6P56747 INTS4P1-203ENST00000641008 3683 ntBASIC13.4□□□□□ -0.27
CLDN6P56747 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN6P56747 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CLDN6P56747 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.39□□□□□ -0.27
CLDN6P56747 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN6P56747 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.39□□□□□ -0.27
CLDN6P56747 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CLDN6P56747 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.39□□□□□ -0.27
CLDN6P56747 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN6P56747 AC022080.1-201ENST00000366255 781 ntBASIC13.39□□□□□ -0.27
CLDN6P56747 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CLDN6P56747 AC004522.1-201ENST00000419978 654 ntBASIC13.39□□□□□ -0.27
CLDN6P56747 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CLDN6P56747 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN6P56747 KRT18P62-201ENST00000446618 1287 ntBASIC13.39□□□□□ -0.27
CLDN6P56747 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
CLDN6P56747 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN6P56747 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN6P56747 FTLP5-201ENST00000586853 534 ntBASIC13.39□□□□□ -0.27
CLDN6P56747 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
CLDN6P56747 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms