Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.4■□□□□ 0.38
COL15A1P39059 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.4■□□□□ 0.38
COL15A1P39059 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.4■□□□□ 0.38
COL15A1P39059 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC17.4■□□□□ 0.38
COL15A1P39059 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
COL15A1P39059 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 CTSL-202ENST00000342020 933 ntTSL 2 BASIC17.4■□□□□ 0.38
COL15A1P39059 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COL15A1P39059 CCND3P1-201ENST00000438347 580 ntBASIC17.4■□□□□ 0.38
COL15A1P39059 RPL29P2-201ENST00000488409 460 ntBASIC17.4■□□□□ 0.38
COL15A1P39059 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC17.4■□□□□ 0.38
COL15A1P39059 ACY3-202ENST00000529256 933 ntTSL 3 BASIC17.4■□□□□ 0.38
COL15A1P39059 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC17.4■□□□□ 0.38
COL15A1P39059 AC016582.2-202ENST00000587765 1094 ntBASIC17.4■□□□□ 0.38
COL15A1P39059 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COL15A1P39059 PHF23-213ENST00000613632 850 ntTSL 5 BASIC17.4■□□□□ 0.38
COL15A1P39059 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC17.4■□□□□ 0.38
COL15A1P39059 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL15A1P39059 AC011474.4-201ENST00000623523 2076 ntBASIC17.4■□□□□ 0.38
COL15A1P39059 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC17.39■□□□□ 0.38
COL15A1P39059 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
COL15A1P39059 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
COL15A1P39059 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 GUCY2EP-203ENST00000531117 1918 ntBASIC17.39■□□□□ 0.37
COL15A1P39059 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
COL15A1P39059 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.39■□□□□ 0.37
COL15A1P39059 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
COL15A1P39059 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC17.39■□□□□ 0.37
COL15A1P39059 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
COL15A1P39059 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.39■□□□□ 0.37
COL15A1P39059 AC041040.2-201ENST00000622926 2899 ntBASIC17.39■□□□□ 0.37
COL15A1P39059 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC17.39■□□□□ 0.37
COL15A1P39059 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 CD37-203ENST00000426897 1204 ntTSL 2 BASIC17.39■□□□□ 0.37
COL15A1P39059 RN7SL684P-201ENST00000465665 294 ntBASIC17.39■□□□□ 0.37
COL15A1P39059 RNA5SP420-201ENST00000516997 137 ntBASIC17.39■□□□□ 0.37
COL15A1P39059 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC17.39■□□□□ 0.37
COL15A1P39059 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC17.39■□□□□ 0.37
COL15A1P39059 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 FTLP5-201ENST00000586853 534 ntBASIC17.39■□□□□ 0.37
COL15A1P39059 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC17.39■□□□□ 0.37
COL15A1P39059 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 AL928654.5-201ENST00000624831 2501 ntBASIC17.39■□□□□ 0.37
COL15A1P39059 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL15A1P39059 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC17.38■□□□□ 0.37
COL15A1P39059 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC17.38■□□□□ 0.37
COL15A1P39059 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
COL15A1P39059 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
COL15A1P39059 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 LINC02486-201ENST00000604157 3000 ntBASIC17.38■□□□□ 0.37
COL15A1P39059 EML1-203ENST00000334192 4064 ntTSL 5 BASIC17.38■□□□□ 0.37
COL15A1P39059 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
COL15A1P39059 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
COL15A1P39059 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC17.38■□□□□ 0.37
COL15A1P39059 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL15A1P39059 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC17.38■□□□□ 0.37
COL15A1P39059 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
COL15A1P39059 MIR632-201ENST00000385193 94 ntBASIC17.38■□□□□ 0.37
COL15A1P39059 KRT18P33-201ENST00000398525 1043 ntBASIC17.38■□□□□ 0.37
COL15A1P39059 FDPSP7-201ENST00000429043 1054 ntBASIC17.38■□□□□ 0.37
COL15A1P39059 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC17.38■□□□□ 0.37
COL15A1P39059 KRT19P4-201ENST00000443208 943 ntBASIC17.38■□□□□ 0.37
COL15A1P39059 AC004923.3-201ENST00000527532 355 ntBASIC17.38■□□□□ 0.37
COL15A1P39059 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC17.38■□□□□ 0.37
COL15A1P39059 RN7SL602P-201ENST00000578326 324 ntBASIC17.38■□□□□ 0.37
COL15A1P39059 RN7SL134P-201ENST00000579756 303 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms