Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC14.06□□□□□ -0.16
LTBRP36941 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBRP36941 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
LTBRP36941 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBRP36941 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LTBRP36941 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBRP36941 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LTBRP36941 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.06□□□□□ -0.16
LTBRP36941 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.06□□□□□ -0.16
LTBRP36941 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBRP36941 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.06□□□□□ -0.16
LTBRP36941 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.05□□□□□ -0.16
LTBRP36941 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
LTBRP36941 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.05□□□□□ -0.16
LTBRP36941 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.05□□□□□ -0.16
LTBRP36941 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LTBRP36941 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC14.05□□□□□ -0.16
LTBRP36941 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 AKR1C6P-201ENST00000432950 983 ntBASIC14.05□□□□□ -0.16
LTBRP36941 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 RN7SL479P-201ENST00000472003 300 ntBASIC14.05□□□□□ -0.16
LTBRP36941 RN7SL452P-201ENST00000482923 291 ntBASIC14.05□□□□□ -0.16
LTBRP36941 RN7SL87P-201ENST00000497657 288 ntBASIC14.05□□□□□ -0.16
LTBRP36941 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LTBRP36941 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC14.05□□□□□ -0.16
LTBRP36941 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC14.05□□□□□ -0.16
LTBRP36941 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
LTBRP36941 AC022382.1-201ENST00000602768 336 ntBASIC14.05□□□□□ -0.16
LTBRP36941 AC006273.1-201ENST00000606966 861 ntBASIC14.05□□□□□ -0.16
LTBRP36941 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC14.05□□□□□ -0.16
LTBRP36941 MIR6165-201ENST00000614803 84 ntBASIC14.05□□□□□ -0.16
LTBRP36941 AC127002.1-201ENST00000619123 455 ntBASIC14.05□□□□□ -0.16
LTBRP36941 AC010601.2-201ENST00000623060 774 ntBASIC14.05□□□□□ -0.16
LTBRP36941 AC117500.5-201ENST00000623233 527 ntBASIC14.05□□□□□ -0.16
LTBRP36941 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC14.05□□□□□ -0.16
LTBRP36941 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.05□□□□□ -0.16
LTBRP36941 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 AC020763.3-201ENST00000625095 2904 ntBASIC14.05□□□□□ -0.16
LTBRP36941 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.05□□□□□ -0.16
LTBRP36941 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LTBRP36941 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.05□□□□□ -0.16
LTBRP36941 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBRP36941 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LTBRP36941 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 TBC1D3P1-201ENST00000590047 1693 ntBASIC14.04□□□□□ -0.16
LTBRP36941 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.04□□□□□ -0.16
LTBRP36941 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
LTBRP36941 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.04□□□□□ -0.16
LTBRP36941 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LTBRP36941 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LTBRP36941 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 AC024475.2-201ENST00000312173 879 ntBASIC14.04□□□□□ -0.16
LTBRP36941 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 RN7SKP255-201ENST00000363442 313 ntBASIC14.04□□□□□ -0.16
LTBRP36941 RN7SKP203-201ENST00000363618 332 ntBASIC14.04□□□□□ -0.16
LTBRP36941 RN7SKP71-201ENST00000364558 318 ntBASIC14.04□□□□□ -0.16
LTBRP36941 7SK.1-201ENST00000365328 331 ntBASIC14.04□□□□□ -0.16
LTBRP36941 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
LTBRP36941 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LTBRP36941 AP000343.1-201ENST00000440602 385 ntBASIC14.04□□□□□ -0.16
LTBRP36941 AL137077.1-201ENST00000442115 528 ntBASIC14.04□□□□□ -0.16
LTBRP36941 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC14.04□□□□□ -0.16
LTBRP36941 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC14.04□□□□□ -0.16
LTBRP36941 NEMF-210ENST00000556672 590 ntTSL 2 BASIC14.04□□□□□ -0.16
LTBRP36941 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC14.04□□□□□ -0.16
LTBRP36941 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC14.04□□□□□ -0.16
LTBRP36941 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC14.04□□□□□ -0.16
LTBRP36941 AC116036.2-201ENST00000607592 462 ntBASIC14.04□□□□□ -0.16
LTBRP36941 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms