Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC18.37■□□□□ 0.53
USP6P35125 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
USP6P35125 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
USP6P35125 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
USP6P35125 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
USP6P35125 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC18.36■□□□□ 0.53
USP6P35125 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC18.36■□□□□ 0.53
USP6P35125 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
USP6P35125 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC18.36■□□□□ 0.53
USP6P35125 AC098657.1-201ENST00000416270 1135 ntBASIC18.36■□□□□ 0.53
USP6P35125 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC18.36■□□□□ 0.53
USP6P35125 RPE-208ENST00000436630 1128 ntTSL 2 BASIC18.36■□□□□ 0.53
USP6P35125 YY1P2-201ENST00000438766 948 ntBASIC18.36■□□□□ 0.53
USP6P35125 MBP-230ENST00000528160 584 ntTSL 5 BASIC18.36■□□□□ 0.53
USP6P35125 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.36■□□□□ 0.53
USP6P35125 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP6P35125 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
USP6P35125 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.36■□□□□ 0.53
USP6P35125 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC18.35■□□□□ 0.53
USP6P35125 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC18.35■□□□□ 0.53
USP6P35125 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USP6P35125 SRL-202ENST00000537996 1814 ntTSL 2 BASIC18.35■□□□□ 0.53
USP6P35125 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.35■□□□□ 0.53
USP6P35125 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC18.35■□□□□ 0.53
USP6P35125 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 RBMXP1-201ENST00000408004 1191 ntBASIC18.35■□□□□ 0.53
USP6P35125 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USP6P35125 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC18.35■□□□□ 0.53
USP6P35125 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC18.35■□□□□ 0.53
USP6P35125 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC18.35■□□□□ 0.53
USP6P35125 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC18.35■□□□□ 0.53
USP6P35125 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC18.35■□□□□ 0.53
USP6P35125 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC18.35■□□□□ 0.53
USP6P35125 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC18.35■□□□□ 0.53
USP6P35125 SNX20-205ENST00000610485 557 ntTSL 5 BASIC18.35■□□□□ 0.53
USP6P35125 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC18.35■□□□□ 0.53
USP6P35125 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC18.35■□□□□ 0.53
USP6P35125 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USP6P35125 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC18.35■□□□□ 0.53
USP6P35125 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.35■□□□□ 0.53
USP6P35125 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.35■□□□□ 0.53
USP6P35125 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP6P35125 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
USP6P35125 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC18.34■□□□□ 0.53
USP6P35125 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC18.34■□□□□ 0.53
USP6P35125 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
USP6P35125 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
USP6P35125 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
USP6P35125 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 RN7SKP255-201ENST00000363442 313 ntBASIC18.34■□□□□ 0.53
USP6P35125 RN7SKP203-201ENST00000363618 332 ntBASIC18.34■□□□□ 0.53
USP6P35125 RN7SKP71-201ENST00000364558 318 ntBASIC18.34■□□□□ 0.53
USP6P35125 7SK.1-201ENST00000365328 331 ntBASIC18.34■□□□□ 0.53
USP6P35125 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC18.34■□□□□ 0.53
USP6P35125 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms