Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RXRBP28702 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RXRBP28702 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC17.69■□□□□ 0.42
RXRBP28702 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 AC005077.3-201ENST00000449614 213 ntBASIC17.69■□□□□ 0.42
RXRBP28702 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC17.69■□□□□ 0.42
RXRBP28702 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC17.69■□□□□ 0.42
RXRBP28702 AC096713.1-201ENST00000514650 978 ntBASIC17.69■□□□□ 0.42
RXRBP28702 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC17.69■□□□□ 0.42
RXRBP28702 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC17.69■□□□□ 0.42
RXRBP28702 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC17.69■□□□□ 0.42
RXRBP28702 RN7SL733P-201ENST00000582253 329 ntBASIC17.69■□□□□ 0.42
RXRBP28702 SRGAP3-AS2-203ENST00000600323 1294 ntTSL 5 BASIC17.69■□□□□ 0.42
RXRBP28702 RN7SL248P-201ENST00000615117 329 ntBASIC17.69■□□□□ 0.42
RXRBP28702 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC17.69■□□□□ 0.42
RXRBP28702 RN7SL453P-201ENST00000620275 329 ntBASIC17.69■□□□□ 0.42
RXRBP28702 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.69■□□□□ 0.42
RXRBP28702 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC17.69■□□□□ 0.42
RXRBP28702 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC17.69■□□□□ 0.42
RXRBP28702 AL022313.4-201ENST00000562756 2046 ntBASIC17.69■□□□□ 0.42
RXRBP28702 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 AC025538.1-201ENST00000510707 1486 ntBASIC17.69■□□□□ 0.42
RXRBP28702 LINC00554-201ENST00000564841 3011 ntBASIC17.69■□□□□ 0.42
RXRBP28702 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RXRBP28702 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.69■□□□□ 0.42
RXRBP28702 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RXRBP28702 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.68■□□□□ 0.42
RXRBP28702 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RXRBP28702 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RXRBP28702 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RXRBP28702 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RXRBP28702 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.68■□□□□ 0.42
RXRBP28702 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RXRBP28702 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RXRBP28702 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC17.68■□□□□ 0.42
RXRBP28702 AC064836.1-201ENST00000405197 704 ntBASIC17.68■□□□□ 0.42
RXRBP28702 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC17.68■□□□□ 0.42
RXRBP28702 AP000346.2-202ENST00000425948 383 ntBASIC17.68■□□□□ 0.42
RXRBP28702 AC012358.2-201ENST00000430010 1434 ntBASIC17.68■□□□□ 0.42
RXRBP28702 AC103925.1-201ENST00000453155 771 ntTSL 3 BASIC17.68■□□□□ 0.42
RXRBP28702 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC17.68■□□□□ 0.42
RXRBP28702 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC17.68■□□□□ 0.42
RXRBP28702 IGHV3-60-201ENST00000521678 354 ntBASIC17.68■□□□□ 0.42
RXRBP28702 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RXRBP28702 AC069366.2-201ENST00000583643 430 ntBASIC17.68■□□□□ 0.42
RXRBP28702 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC17.68■□□□□ 0.42
RXRBP28702 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC17.68■□□□□ 0.42
RXRBP28702 UBR1-212ENST00000627960 189 ntTSL 5 BASIC17.68■□□□□ 0.42
RXRBP28702 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RXRBP28702 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RXRBP28702 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RXRBP28702 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC17.68■□□□□ 0.42
RXRBP28702 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC17.68■□□□□ 0.42
RXRBP28702 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.68■□□□□ 0.42
RXRBP28702 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RXRBP28702 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RXRBP28702 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RXRBP28702 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC17.67■□□□□ 0.42
RXRBP28702 JAML-211ENST00000533261 1508 ntTSL 5 BASIC17.67■□□□□ 0.42
RXRBP28702 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 AC089987.1-201ENST00000551654 2209 ntBASIC17.67■□□□□ 0.42
RXRBP28702 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.67■□□□□ 0.42
RXRBP28702 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
RXRBP28702 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.67■□□□□ 0.42
RXRBP28702 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RXRBP28702 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.67■□□□□ 0.42
RXRBP28702 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RXRBP28702 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RXRBP28702 TMEM176A-201ENST00000004103 1261 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 CTF2P-201ENST00000412003 604 ntBASIC17.67■□□□□ 0.42
RXRBP28702 AC005822.1-201ENST00000414124 1034 ntBASIC17.67■□□□□ 0.42
RXRBP28702 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC17.67■□□□□ 0.42
RXRBP28702 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC17.67■□□□□ 0.42
RXRBP28702 AC007255.1-202ENST00000447171 889 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 CMTM1-206ENST00000457188 765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 RN7SL483P-201ENST00000478417 285 ntBASIC17.67■□□□□ 0.42
RXRBP28702 IGKV1-8-201ENST00000495489 398 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RXRBP28702 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 SLC25A5P6-201ENST00000515328 886 ntBASIC17.67■□□□□ 0.42
RXRBP28702 CMTM1-215ENST00000531885 590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 B9D1-213ENST00000575403 928 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RXRBP28702 AP001120.3-201ENST00000585729 489 ntBASIC17.67■□□□□ 0.42
RXRBP28702 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms