Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
CD40P25942 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 AC008620.2-201ENST00000510294 1569 ntBASIC12.05□□□□□ -0.48
CD40P25942 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.05□□□□□ -0.48
CD40P25942 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.05□□□□□ -0.48
CD40P25942 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CD40P25942 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
CD40P25942 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 BAK1P1-201ENST00000317045 636 ntBASIC12.05□□□□□ -0.48
CD40P25942 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CD40P25942 ACTG1P19-201ENST00000418987 1116 ntBASIC12.05□□□□□ -0.48
CD40P25942 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.05□□□□□ -0.48
CD40P25942 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC12.05□□□□□ -0.48
CD40P25942 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.05□□□□□ -0.48
CD40P25942 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.05□□□□□ -0.48
CD40P25942 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.05□□□□□ -0.48
CD40P25942 STK24P1-201ENST00000455035 1291 ntBASIC12.05□□□□□ -0.48
CD40P25942 VENTXP3-201ENST00000546480 773 ntBASIC12.05□□□□□ -0.48
CD40P25942 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.05□□□□□ -0.48
CD40P25942 AL132994.1-201ENST00000554098 400 ntBASIC12.05□□□□□ -0.48
CD40P25942 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.05□□□□□ -0.48
CD40P25942 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.05□□□□□ -0.48
CD40P25942 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CD40P25942 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.05□□□□□ -0.48
CD40P25942 AC002044.2-201ENST00000624910 970 ntBASIC12.05□□□□□ -0.48
CD40P25942 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.05□□□□□ -0.48
CD40P25942 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
CD40P25942 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 AC025271.4-201ENST00000621477 1726 ntBASIC12.05□□□□□ -0.48
CD40P25942 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.05□□□□□ -0.48
CD40P25942 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.05□□□□□ -0.48
CD40P25942 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CD40P25942 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CD40P25942 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.05□□□□□ -0.48
CD40P25942 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CD40P25942 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.05□□□□□ -0.48
CD40P25942 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
CD40P25942 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.04□□□□□ -0.48
CD40P25942 AC023908.3-201ENST00000564211 3047 ntBASIC12.04□□□□□ -0.48
CD40P25942 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CD40P25942 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.04□□□□□ -0.48
CD40P25942 AK2P2-201ENST00000439142 405 ntBASIC12.04□□□□□ -0.48
CD40P25942 PIN4P1-201ENST00000451079 396 ntBASIC12.04□□□□□ -0.48
CD40P25942 AC093300.1-201ENST00000510368 1201 ntBASIC12.04□□□□□ -0.48
CD40P25942 CTBP2P4-201ENST00000513884 920 ntBASIC12.04□□□□□ -0.48
CD40P25942 AC100858.1-201ENST00000514059 1228 ntBASIC12.04□□□□□ -0.48
CD40P25942 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms