Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TOP2AP11388 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
TOP2AP11388 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC23.49■■□□□ 1.35
TOP2AP11388 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TOP2AP11388 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC23.49■■□□□ 1.35
TOP2AP11388 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC23.49■■□□□ 1.35
TOP2AP11388 AADAC-202ENST00000488869 719 ntTSL 2 BASIC23.49■■□□□ 1.35
TOP2AP11388 AC099343.1-201ENST00000513481 609 ntBASIC23.49■■□□□ 1.35
TOP2AP11388 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TOP2AP11388 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC23.49■■□□□ 1.35
TOP2AP11388 MIR4526-201ENST00000583168 87 ntBASIC23.49■■□□□ 1.35
TOP2AP11388 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
TOP2AP11388 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TOP2AP11388 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC23.49■■□□□ 1.35
TOP2AP11388 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC23.49■■□□□ 1.35
TOP2AP11388 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TOP2AP11388 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
TOP2AP11388 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
TOP2AP11388 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
TOP2AP11388 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TOP2AP11388 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TOP2AP11388 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TOP2AP11388 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TOP2AP11388 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TOP2AP11388 AGAP10P-201ENST00000454844 2418 ntBASIC23.49■■□□□ 1.35
TOP2AP11388 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC23.49■■□□□ 1.35
TOP2AP11388 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
TOP2AP11388 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC23.49■■□□□ 1.35
TOP2AP11388 MIR324-201ENST00000362183 83 ntBASIC23.49■■□□□ 1.35
TOP2AP11388 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC23.49■■□□□ 1.35
TOP2AP11388 CASP2-203ENST00000392925 616 ntTSL 3 BASIC23.49■■□□□ 1.35
TOP2AP11388 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
TOP2AP11388 PGAM1P10-201ENST00000402426 761 ntBASIC23.49■■□□□ 1.35
TOP2AP11388 SERF2-205ENST00000403425 690 ntTSL 2 BASIC23.49■■□□□ 1.35
TOP2AP11388 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC23.49■■□□□ 1.35
TOP2AP11388 RNASEH2CP1-201ENST00000454281 502 ntBASIC23.49■■□□□ 1.35
TOP2AP11388 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC23.49■■□□□ 1.35
TOP2AP11388 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TOP2AP11388 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
TOP2AP11388 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC23.49■■□□□ 1.35
TOP2AP11388 HAX1-211ENST00000532105 771 ntTSL 3 BASIC23.49■■□□□ 1.35
TOP2AP11388 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC23.49■■□□□ 1.35
TOP2AP11388 TPST2P1-201ENST00000564073 1102 ntBASIC23.49■■□□□ 1.35
TOP2AP11388 MIR4763-201ENST00000581461 92 ntBASIC23.49■■□□□ 1.35
TOP2AP11388 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC23.49■■□□□ 1.35
TOP2AP11388 AC063977.2-201ENST00000601996 421 ntBASIC23.49■■□□□ 1.35
TOP2AP11388 AC134878.2-201ENST00000620700 1265 ntBASIC23.49■■□□□ 1.35
TOP2AP11388 LINC00643-207ENST00000637212 734 ntBASIC23.49■■□□□ 1.35
TOP2AP11388 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TOP2AP11388 AC097474.1-201ENST00000506481 1371 ntBASIC23.48■■□□□ 1.35
TOP2AP11388 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TOP2AP11388 KRT8P5-201ENST00000592443 1458 ntBASIC23.48■■□□□ 1.35
TOP2AP11388 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC23.48■■□□□ 1.35
TOP2AP11388 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TOP2AP11388 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC23.48■■□□□ 1.35
TOP2AP11388 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TOP2AP11388 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC23.48■■□□□ 1.35
TOP2AP11388 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC23.48■■□□□ 1.35
TOP2AP11388 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
TOP2AP11388 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC23.48■■□□□ 1.35
TOP2AP11388 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC23.48■■□□□ 1.35
TOP2AP11388 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC23.48■■□□□ 1.35
TOP2AP11388 AC008267.3-201ENST00000448776 712 ntBASIC23.48■■□□□ 1.35
TOP2AP11388 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC23.48■■□□□ 1.35
TOP2AP11388 SLC25A15P1-201ENST00000456738 342 ntBASIC23.48■■□□□ 1.35
TOP2AP11388 MYL6-210ENST00000548400 573 ntTSL 3 BASIC23.48■■□□□ 1.35
TOP2AP11388 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC23.48■■□□□ 1.35
TOP2AP11388 AHCYP7-201ENST00000560847 1308 ntBASIC23.48■■□□□ 1.35
TOP2AP11388 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TOP2AP11388 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC23.47■■□□□ 1.35
TOP2AP11388 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
TOP2AP11388 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC23.47■■□□□ 1.35
TOP2AP11388 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC23.47■■□□□ 1.35
TOP2AP11388 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TOP2AP11388 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TOP2AP11388 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TOP2AP11388 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
TOP2AP11388 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC23.47■■□□□ 1.35
TOP2AP11388 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TOP2AP11388 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TOP2AP11388 RN7SL76P-201ENST00000482435 289 ntBASIC23.47■■□□□ 1.35
TOP2AP11388 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC23.47■■□□□ 1.35
TOP2AP11388 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC23.47■■□□□ 1.35
TOP2AP11388 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TOP2AP11388 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
TOP2AP11388 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TOP2AP11388 FKBP4P1-201ENST00000507284 1347 ntBASIC23.47■■□□□ 1.35
TOP2AP11388 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
TOP2AP11388 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TOP2AP11388 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TOP2AP11388 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TOP2AP11388 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TOP2AP11388 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TOP2AP11388 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TOP2AP11388 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC23.46■■□□□ 1.35
TOP2AP11388 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC23.46■■□□□ 1.35
TOP2AP11388 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TOP2AP11388 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC23.46■■□□□ 1.35
TOP2AP11388 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
TOP2AP11388 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms