Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC15.77■□□□□ 0.12
TPM3P06753 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TPM3P06753 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.77■□□□□ 0.12
TPM3P06753 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.77■□□□□ 0.12
TPM3P06753 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.77■□□□□ 0.12
TPM3P06753 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.77■□□□□ 0.12
TPM3P06753 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.77■□□□□ 0.12
TPM3P06753 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.77■□□□□ 0.12
TPM3P06753 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.77■□□□□ 0.12
TPM3P06753 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.77■□□□□ 0.12
TPM3P06753 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TPM3P06753 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TPM3P06753 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC15.77■□□□□ 0.11
TPM3P06753 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TPM3P06753 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC15.77■□□□□ 0.11
TPM3P06753 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TPM3P06753 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TPM3P06753 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TPM3P06753 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
TPM3P06753 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TPM3P06753 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TPM3P06753 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TPM3P06753 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TPM3P06753 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
TPM3P06753 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TPM3P06753 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TPM3P06753 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TPM3P06753 MSTO2P-201ENST00000314835 1709 ntBASIC15.77■□□□□ 0.11
TPM3P06753 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC15.77■□□□□ 0.11
TPM3P06753 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TPM3P06753 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC15.76■□□□□ 0.11
TPM3P06753 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC15.76■□□□□ 0.11
TPM3P06753 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC15.76■□□□□ 0.11
TPM3P06753 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC15.76■□□□□ 0.11
TPM3P06753 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.76■□□□□ 0.11
TPM3P06753 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TPM3P06753 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TPM3P06753 HMGA1P1-201ENST00000415560 1062 ntBASIC15.76■□□□□ 0.11
TPM3P06753 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.76■□□□□ 0.11
TPM3P06753 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.76■□□□□ 0.11
TPM3P06753 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.76■□□□□ 0.11
TPM3P06753 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.76■□□□□ 0.11
TPM3P06753 AL512310.5-201ENST00000551999 515 ntBASIC15.76■□□□□ 0.11
TPM3P06753 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TPM3P06753 CTBP2P3-201ENST00000585629 1255 ntBASIC15.76■□□□□ 0.11
TPM3P06753 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.76■□□□□ 0.11
TPM3P06753 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 AOC4P-203ENST00000566825 2289 ntBASIC15.76■□□□□ 0.11
TPM3P06753 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 RCC2P1-201ENST00000452257 1476 ntBASIC15.76■□□□□ 0.11
TPM3P06753 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TPM3P06753 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TPM3P06753 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC15.76■□□□□ 0.11
TPM3P06753 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TPM3P06753 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TPM3P06753 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 FTO-214ENST00000636218 2227 ntTSL 5 BASIC15.75■□□□□ 0.11
TPM3P06753 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.75■□□□□ 0.11
TPM3P06753 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms