Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DOAP06340 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DOAP06340 AC106827.1-201ENST00000366454 431 ntBASIC16.39■□□□□ 0.21
HLA-DOAP06340 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 ASS1P2-201ENST00000439895 1223 ntBASIC16.39■□□□□ 0.21
HLA-DOAP06340 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 BAK1P2-201ENST00000532665 631 ntBASIC16.39■□□□□ 0.21
HLA-DOAP06340 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 AC055811.3-201ENST00000584952 686 ntBASIC16.39■□□□□ 0.21
HLA-DOAP06340 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DOAP06340 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.39■□□□□ 0.21
HLA-DOAP06340 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DOAP06340 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DOAP06340 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.39■□□□□ 0.21
HLA-DOAP06340 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DOAP06340 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DOAP06340 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HLA-DOAP06340 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 AC092115.1-201ENST00000566277 1402 ntBASIC16.38■□□□□ 0.21
HLA-DOAP06340 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 AP000244.1-201ENST00000424582 201 ntBASIC16.38■□□□□ 0.21
HLA-DOAP06340 BPIFB5P-201ENST00000457066 1099 ntBASIC16.38■□□□□ 0.21
HLA-DOAP06340 RN7SL351P-201ENST00000469306 248 ntBASIC16.38■□□□□ 0.21
HLA-DOAP06340 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 ALG1L3P-201ENST00000503331 765 ntBASIC16.38■□□□□ 0.21
HLA-DOAP06340 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 AL136982.5-201ENST00000605222 294 ntBASIC16.38■□□□□ 0.21
HLA-DOAP06340 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 CR392039.2-201ENST00000623182 509 ntBASIC16.38■□□□□ 0.21
HLA-DOAP06340 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 Z98885.3-201ENST00000624882 1757 ntBASIC16.38■□□□□ 0.21
HLA-DOAP06340 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DOAP06340 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DOAP06340 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DOAP06340 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DOAP06340 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DOAP06340 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DOAP06340 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DOAP06340 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DOAP06340 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DOAP06340 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
HLA-DOAP06340 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.37■□□□□ 0.21
HLA-DOAP06340 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DOAP06340 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.37■□□□□ 0.21
HLA-DOAP06340 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DOAP06340 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
HLA-DOAP06340 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DOAP06340 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DOAP06340 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DOAP06340 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DOAP06340 OR51A9P-201ENST00000422578 911 ntBASIC16.37■□□□□ 0.21
HLA-DOAP06340 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.37■□□□□ 0.21
HLA-DOAP06340 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC16.37■□□□□ 0.21
HLA-DOAP06340 KRT18P46-201ENST00000435568 1279 ntBASIC16.37■□□□□ 0.21
HLA-DOAP06340 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DOAP06340 AC141586.1-203ENST00000567242 366 ntBASIC16.37■□□□□ 0.21
HLA-DOAP06340 AC010632.2-201ENST00000588369 1224 ntBASIC16.37■□□□□ 0.21
HLA-DOAP06340 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HLA-DOAP06340 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms