Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.1□□□□□ -0.31
HMGN2P05204 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
HMGN2P05204 MARK2P16-201ENST00000605714 1723 ntBASIC13.1□□□□□ -0.31
HMGN2P05204 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HMGN2P05204 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.1□□□□□ -0.31
HMGN2P05204 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.1□□□□□ -0.31
HMGN2P05204 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HMGN2P05204 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.09□□□□□ -0.31
HMGN2P05204 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.09□□□□□ -0.31
HMGN2P05204 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.09□□□□□ -0.31
HMGN2P05204 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
HMGN2P05204 PCDHA6-201ENST00000378126 3267 ntBASIC13.09□□□□□ -0.31
HMGN2P05204 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
HMGN2P05204 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 KRT17P5-201ENST00000332088 839 ntBASIC13.09□□□□□ -0.31
HMGN2P05204 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.09□□□□□ -0.31
HMGN2P05204 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.09□□□□□ -0.31
HMGN2P05204 SLC25A15P3-201ENST00000505530 290 ntBASIC13.09□□□□□ -0.31
HMGN2P05204 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HMGN2P05204 AC090857.1-201ENST00000527400 390 ntBASIC13.09□□□□□ -0.31
HMGN2P05204 AP001258.2-201ENST00000529891 490 ntBASIC13.09□□□□□ -0.31
HMGN2P05204 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.09□□□□□ -0.31
HMGN2P05204 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.09□□□□□ -0.31
HMGN2P05204 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 AL161773.1-201ENST00000624845 863 ntBASIC13.09□□□□□ -0.31
HMGN2P05204 AC100757.4-201ENST00000626934 759 ntBASIC13.09□□□□□ -0.31
HMGN2P05204 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.09□□□□□ -0.31
HMGN2P05204 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
HMGN2P05204 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.09□□□□□ -0.31
HMGN2P05204 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 AC099521.3-201ENST00000624251 2938 ntBASIC13.09□□□□□ -0.31
HMGN2P05204 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HMGN2P05204 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HMGN2P05204 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.08□□□□□ -0.31
HMGN2P05204 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
HMGN2P05204 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
HMGN2P05204 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
HMGN2P05204 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HMGN2P05204 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
HMGN2P05204 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HMGN2P05204 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HMGN2P05204 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HMGN2P05204 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HMGN2P05204 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.08□□□□□ -0.32
HMGN2P05204 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
HMGN2P05204 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HMGN2P05204 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
HMGN2P05204 AC019294.4-201ENST00000561777 2905 ntBASIC13.08□□□□□ -0.32
HMGN2P05204 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HMGN2P05204 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.08□□□□□ -0.32
HMGN2P05204 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HMGN2P05204 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.08□□□□□ -0.32
HMGN2P05204 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.08□□□□□ -0.32
HMGN2P05204 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HMGN2P05204 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
HMGN2P05204 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HMGN2P05204 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HMGN2P05204 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HMGN2P05204 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HMGN2P05204 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HMGN2P05204 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms