Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KIAA1549Q9HCM3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 AL445250.1-201ENST00000641671 2259 ntBASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 ACTBP14-201ENST00000411655 1089 ntBASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 AL157792.1-201ENST00000488281 530 ntBASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 AC100858.1-201ENST00000514059 1228 ntBASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 MT3-202ENST00000561640 514 ntTSL 3 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 AC011247.3-201ENST00000603297 438 ntBASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 AC073592.2-201ENST00000623062 780 ntBASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 AC138466.4-201ENST00000623965 852 ntBASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 AC007336.3-201ENST00000623886 2160 ntBASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.31□□□□□ -0.44
KIAA1549Q9HCM3 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 ABCD1P4-201ENST00000399687 604 ntBASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 MIR1227-201ENST00000408484 88 ntBASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 KRT17P4-201ENST00000429445 819 ntBASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 MSNP1-201ENST00000511640 1732 ntBASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms