Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 DUX4L45-201ENST00000566406 1057 ntBASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 AP000437.1-201ENST00000624057 2085 ntBASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.03□□□□□ -0.32
POLR2J2Q9GZM3 AC005014.1-201ENST00000432006 2976 ntBASIC13.02□□□□□ -0.32
POLR2J2Q9GZM3 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
POLR2J2Q9GZM3 DLX4-206ENST00000611342 1662 ntBASIC13.02□□□□□ -0.32
POLR2J2Q9GZM3 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
POLR2J2Q9GZM3 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.02□□□□□ -0.32
POLR2J2Q9GZM3 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.02□□□□□ -0.32
POLR2J2Q9GZM3 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
POLR2J2Q9GZM3 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
POLR2J2Q9GZM3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
POLR2J2Q9GZM3 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
POLR2J2Q9GZM3 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 HMGN1P19-201ENST00000436976 333 ntBASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 AC024075.2-201ENST00000598112 1473 ntBASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
POLR2J2Q9GZM3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms