Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 AC239868.1-201ENST00000369385 493 ntBASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 RPS2P32-201ENST00000439199 892 ntBASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 AL596276.2-201ENST00000447525 331 ntBASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 AC022494.1-201ENST00000466044 728 ntBASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 AL133467.4-201ENST00000602953 725 ntBASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 AC100757.4-201ENST00000626934 759 ntBASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 AC004554.1-201ENST00000422830 1468 ntBASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RSPO3Q9BXY4 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 VENTXP1-201ENST00000569334 2716 ntBASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 PES1P2-201ENST00000449745 1735 ntBASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.77□□□□□ -0.36
RSPO3Q9BXY4 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 MIR645-201ENST00000385283 94 ntBASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 BANF1P3-201ENST00000412556 261 ntBASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 ACTG1P2-201ENST00000415776 1125 ntBASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 PPP1R2P4-201ENST00000424051 595 ntBASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 ACTG1P11-201ENST00000425411 1125 ntBASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 EEF1DP2-201ENST00000433698 843 ntBASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.77□□□□□ -0.37
RSPO3Q9BXY4 MIR3940-201ENST00000579148 102 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms