Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC078875.1-201ENST00000431907 724 ntBASIC12.83□□□□□ -0.36
USB1Q9BQ65 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 AL353637.1-201ENST00000451571 732 ntBASIC12.83□□□□□ -0.36
USB1Q9BQ65 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 AC008840.1-201ENST00000512486 809 ntTSL 5 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 AC009779.1-201ENST00000551138 283 ntBASIC12.83□□□□□ -0.36
USB1Q9BQ65 MIR4783-201ENST00000580343 82 ntBASIC12.83□□□□□ -0.36
USB1Q9BQ65 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 AC017037.4-201ENST00000624526 826 ntBASIC12.83□□□□□ -0.36
USB1Q9BQ65 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 AC009950.2-201ENST00000636548 183 ntBASIC12.83□□□□□ -0.36
USB1Q9BQ65 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 AC138627.1-207ENST00000641560 1006 ntBASIC12.83□□□□□ -0.36
USB1Q9BQ65 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 FP325330.2-201ENST00000624219 5630 ntBASIC12.82□□□□□ -0.36
USB1Q9BQ65 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 AL590440.2-201ENST00000641973 1595 ntBASIC12.82□□□□□ -0.36
USB1Q9BQ65 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 OR6K3-202ENST00000368146 996 ntBASIC12.82□□□□□ -0.36
USB1Q9BQ65 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 BOLL-205ENST00000433157 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 VDAC1P1-201ENST00000439229 848 ntBASIC12.82□□□□□ -0.36
USB1Q9BQ65 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 TMEM161B-207ENST00000509387 963 ntTSL 2 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 RNU6-415P-201ENST00000516252 97 ntBASIC12.82□□□□□ -0.36
USB1Q9BQ65 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 POU5F1P2-201ENST00000521750 823 ntBASIC12.82□□□□□ -0.36
USB1Q9BQ65 AC023194.3-201ENST00000522679 277 ntTSL 3 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 AC103988.2-201ENST00000561804 725 ntBASIC12.82□□□□□ -0.36
USB1Q9BQ65 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 AC139712.1-201ENST00000378256 1875 ntBASIC12.82□□□□□ -0.36
USB1Q9BQ65 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
USB1Q9BQ65 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
USB1Q9BQ65 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 FAM90A7P-201ENST00000382628 1395 ntBASIC12.81□□□□□ -0.36
USB1Q9BQ65 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 FAM90A23P-201ENST00000400136 1395 ntBASIC12.81□□□□□ -0.36
USB1Q9BQ65 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms