Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 AL450346.2-201ENST00000495602 1024 ntBASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 HNRNPA1P4-201ENST00000509706 756 ntBASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 AC090820.1-201ENST00000519722 591 ntBASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 AL109954.3-201ENST00000615088 558 ntBASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42BPAQ5VT25 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 RNA5SP407-201ENST00000410275 110 ntBASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 AC093106.1-201ENST00000437271 352 ntBASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 ACTG1P23-201ENST00000437653 1074 ntBASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 RN7SL638P-201ENST00000494527 290 ntBASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 MIR4539-201ENST00000579784 60 ntBASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDC42BPAQ5VT25 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 CACYBPP3-201ENST00000406011 625 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 MIR1226-201ENST00000408658 75 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 NOS2P3-201ENST00000411468 867 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 NOS2P2-201ENST00000426269 867 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 Z82244.2-201ENST00000632196 448 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 CDIPT-AS1-203ENST00000638164 713 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 OR2T32P-201ENST00000403423 963 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 TEDDM2P-201ENST00000414169 786 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 RN7SL794P-201ENST00000469816 280 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 RN7SL479P-201ENST00000472003 300 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 RN7SL76P-201ENST00000482435 289 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 AC012146.4-201ENST00000575546 271 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 AC063977.2-201ENST00000601996 421 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 KRT18P40-201ENST00000599859 1571 ntBASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC42BPAQ5VT25 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC20.29■□□□□ 0.84
CDC42BPAQ5VT25 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms