Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.32■□□□□ 0.2
CNTNAP1P78357 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CNTNAP1P78357 POP5-201ENST00000341039 913 ntTSL 2 BASIC16.32■□□□□ 0.2
CNTNAP1P78357 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
CNTNAP1P78357 SNU13-204ENST00000402458 462 ntTSL 3 BASIC16.32■□□□□ 0.2
CNTNAP1P78357 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC16.32■□□□□ 0.2
CNTNAP1P78357 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CNTNAP1P78357 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC16.32■□□□□ 0.2
CNTNAP1P78357 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC16.32■□□□□ 0.2
CNTNAP1P78357 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 AC239600.1-201ENST00000603201 462 ntBASIC16.32■□□□□ 0.2
CNTNAP1P78357 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CNTNAP1P78357 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.32■□□□□ 0.2
CNTNAP1P78357 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.32■□□□□ 0.2
CNTNAP1P78357 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP1P78357 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CNTNAP1P78357 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 AC092865.2-201ENST00000439409 971 ntBASIC16.31■□□□□ 0.2
CNTNAP1P78357 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 AL161727.1-201ENST00000457409 530 ntBASIC16.31■□□□□ 0.2
CNTNAP1P78357 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 AC104117.4-201ENST00000521486 847 ntBASIC16.31■□□□□ 0.2
CNTNAP1P78357 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC16.31■□□□□ 0.2
CNTNAP1P78357 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP1P78357 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CNTNAP1P78357 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP1P78357 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP1P78357 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP1P78357 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP1P78357 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 DNM1P48-201ENST00000419538 439 ntBASIC16.3■□□□□ 0.2
CNTNAP1P78357 AC000078.1-201ENST00000420617 682 ntBASIC16.3■□□□□ 0.2
CNTNAP1P78357 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 AC009517.1-201ENST00000454750 570 ntBASIC16.3■□□□□ 0.2
CNTNAP1P78357 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP1P78357 AC139100.2-201ENST00000616901 662 ntBASIC16.3■□□□□ 0.2
CNTNAP1P78357 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC16.3■□□□□ 0.2
CNTNAP1P78357 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP1P78357 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 251.5 ms