Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.51□□□□□ -0.41
GFRA1P56159 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
GFRA1P56159 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.51□□□□□ -0.41
GFRA1P56159 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 AC117503.4-201ENST00000623229 1418 ntBASIC12.51□□□□□ -0.41
GFRA1P56159 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.51□□□□□ -0.41
GFRA1P56159 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
GFRA1P56159 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.51□□□□□ -0.41
GFRA1P56159 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.51□□□□□ -0.41
GFRA1P56159 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.51□□□□□ -0.41
GFRA1P56159 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
GFRA1P56159 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GFRA1P56159 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.51□□□□□ -0.41
GFRA1P56159 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
GFRA1P56159 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.5□□□□□ -0.41
GFRA1P56159 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.5□□□□□ -0.41
GFRA1P56159 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
GFRA1P56159 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
GFRA1P56159 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.5□□□□□ -0.41
GFRA1P56159 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
GFRA1P56159 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
GFRA1P56159 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.5□□□□□ -0.41
GFRA1P56159 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 AC073210.1-201ENST00000414799 232 ntBASIC12.5□□□□□ -0.41
GFRA1P56159 AC004837.1-201ENST00000446267 564 ntBASIC12.5□□□□□ -0.41
GFRA1P56159 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
GFRA1P56159 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.5□□□□□ -0.41
GFRA1P56159 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.5□□□□□ -0.41
GFRA1P56159 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
GFRA1P56159 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 AF013593.1-201ENST00000458074 1487 ntBASIC12.5□□□□□ -0.41
GFRA1P56159 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 SALL4P6-201ENST00000429385 1691 ntBASIC12.5□□□□□ -0.41
GFRA1P56159 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
GFRA1P56159 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.5□□□□□ -0.41
GFRA1P56159 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
GFRA1P56159 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.49□□□□□ -0.41
GFRA1P56159 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
GFRA1P56159 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
GFRA1P56159 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.49□□□□□ -0.41
GFRA1P56159 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
GFRA1P56159 AC025183.3-201ENST00000623526 1482 ntBASIC12.49□□□□□ -0.41
GFRA1P56159 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GFRA1P56159 STK33P1-201ENST00000423835 1218 ntBASIC12.49□□□□□ -0.41
GFRA1P56159 AC253536.4-201ENST00000440539 267 ntBASIC12.49□□□□□ -0.41
GFRA1P56159 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.49□□□□□ -0.41
GFRA1P56159 RPL35P9-201ENST00000446059 350 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms